Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0774 ATGGAATTCGCGTCTTCTTCATCACCCTTCTCAAAATCCAAAACCCAATGGATGTACGATGTGTTCATCAATTTTAGGGGAGAAGACATCCGTAAGAATTTCGTTTCTCATCTTCATTCTGCCCTTTTACATGCTGAAGTCAAAACTTTCCTTGACGACGAGAATCTACTGAAGGGAATGAAGTCGGAAGAACTGATCCGAGCAATAGAAGGGTCTCAGATTGCAGTAGTTGTTTTCTCCAAAACCTATACCGAATCTAGTTTGTGTCTTCGTGAGCTTGAAAAAATCATTGAAAGCCACGAAACTCGTGGCCAAAGAGTTTTACCCATATTCTACGAAGTTGATCCTTCCGATGTACGTCAGCAGAAGGGTGATTTTGGAGAAGCCTTGAAAGCAGCTGCACAAAAAGGATTTTCAGGAGAACATCTGGAATCTGGGTTGTCGAGGTGGAGCCAAGCCATCACAAAAGCTGCAAACTTGCCTGGTTGGGATGAGAGCAATCACGAGAATGATGCTGAACTAGTGGAGGGAATTATTAACTTCGTTCTTACTAAACTAGACTACGGCTTGTCTATTACTAAATTTCCTGTTGGATTAGAATCCCGCGTGGAAAAAGTTATTGGATTTATTGAAAATCAGTCCACCAAAGTCTGTAAGGTAGGGATATGGGGGATGGGAGGATTGGGTAAAACTACCATTGCCAAAGGCATCTACAATCGAATTCATCGTTCATTCATAGATAAAAGTTTCATTGAAGATGTTAGAGAAGTTTGTGAAACGGATGGCAGAGGGGTTACTCTTTTACAAGAACAACTTCTTTCAGATGTGCTAAAAACAAAGGTCGAGATAACAAGTGTAGGGAAGGGAAGAACTATGATCAAGGGGAGACTTTGTGGAAAAAGGTTGCTCATTGTACTTGATGATGTGAATAAGTTTGGCCAATTAAAAGATCTGTGTGGAAATCATGAATGGTTTGGTCAAGGAAGTGTATTAATCATTACAACTAGAGATCTACACCTACTGGACCTACTTAAAGTTGATTATGTTTATGAAATTGAGGAAATGGACGAAAATGAGTCCCTTCAGCTTTTTAGTTGGCATGCCTTTGGACAACCAAAACCAAGAGAAGACTTCAATGAACTTGCAAGAGATGTAGTTGCTTATTGTGGAGGATTACCATTAGCTCTTGAAGTCCTTGGTTCTCATTTAATTAGTAGGACAGAGACAGAGTGGGAAAGTGCATTGTCAAGGTTAAAAATGACTCCCAATGATCAAATTCAGCAAAAATTAAGAATAAGTTTTGATGATTTATATGATCATATGGAAAAACATATATTTCTTGACATATGTTGTTTCTTTATTGGTAAAGACAAGGTCTATGTTACACACATACTAAATGGATGTGGACTACATGCTGATATTGGGTTAACAGTTCTCATAGAGCGTAGCCTTGTAAAAGTTGAAAAGAATAACAAACTTGCAATGCATAATTTGCTACGAGAAATGGGAAGAGAGATTATTCGTGAAGGTTCAAGAAAGAAACTTGGGAAGCGCAGTCGTTTGTGGTTTGATGAGGATGTAGTTGAAATTTTGACAGAGAAAACTGGGACAGAGGCTATTGAGGGATTGGCTCTGAAATTGCATTCAAACAAAAGATATTGCTTCAAAGCTGATGCTTTTGCAGAAATGAAGAGATTGAGACTGTTGCAACTTGATAATGTAGAACTCACTGGAGATTATAGGTATCTTTCTAAGCAACTGAGATGGATCTCTTGGAAAGGATTTTCTCTAAAATACATACCTAAGAGCTTTTATCTGGAAGGTGCAATTGCAATTGATTTAAAACACAGTAGTCTTAGACTAGTCTGGAAAGAACCCCAGGTTTTGCAGTGGCTAAAATTCCTCAATCTTAGTCACTCCAAGTACTTGAAAGAAACCCCCGACTTTTCAAAATTACCAAATCTTGAAAAGCTCATTCTCACAGATTGTTCAAGTTTGCTCAAGGTACACCAATCCATTGGAGATCTCCAGAATCTTCTATTTATAAATTTGAAGGACTGTAAAAGCCTAAGTAATCTCCCCAGATCGATATATAAATTGAAATCTTTGAGAACTCTCATCCTATCTGGTTGTTCGAAGATTGACACATTGGATGAAGATATAATGCAGATGGAATCCTTGACAACACTAATTGCTGAAAATACTGCTGTGAAACAAGTGCCCTTTCCAATAGTAAGTTCGAAAGGCATTGGGTATATATCCATTTATGGATATGAAGGATTTTCACATCATGTTTATCTTTCTATCATGCGGTCTTGGATGCTACCAAAAATGAATCCCCTATCTTGTATTCGCTCGTTTAGTGGCACTTCATCATCTCCAATTCCCATGGACATGCAGAATAAAAATTTGAGTGATCTAGCACCACCAATTTCAAATTTTCGAAGTGTTGTGGTGCAATGTGAGACAGAGATTCAACTATTTAACCAAATAAGAACAATTCTAGATGATGTGTATGGTGCAAATTTTAGTGAATTAGAAATAACATCATATACATCCCAAAGTTCAAATCATTCCGTGAAGTCTTATTTGATTGGCATTGGAGATTTTGAGCAAGTCTTCATTTCTCTCAGCAACAGCATATCTGAGGGATTGGCAACCTGTGAGTCTTCTGATGTTTTTCTCCCTGGTGACTATTATCCGTATTGGTTGGCTCATACAGAAAAAAAGGGTCTGAAGATGGAGAATTTATCTTGGGGAGCAACTATGATGTGTTGA 2778 0.3798 MEFASSSSPFSKSKTQWMYDVFINFRGEDIRKNFVSHLHSALLHAEVKTFLDDENLLKGMKSEELIRAIEGSQIAVVVFSKTYTESSLCLRELEKIIESHETRGQRVLPIFYEVDPSDVRQQKGDFGEALKAAAQKGFSGEHLESGLSRWSQAITKAANLPGWDESNHENDAELVEGIINFVLTKLDYGLSITKFPVGLESRVEKVIGFIENQSTKVCKVGIWGMGGLGKTTIAKGIYNRIHRSFIDKSFIEDVREVCETDGRGVTLLQEQLLSDVLKTKVEITSVGKGRTMIKGRLCGKRLLIVLDDVNKFGQLKDLCGNHEWFGQGSVLIITTRDLHLLDLLKVDYVYEIEEMDENESLQLFSWHAFGQPKPREDFNELARDVVAYCGGLPLALEVLGSHLISRTETEWESALSRLKMTPNDQIQQKLRISFDDLYDHMEKHIFLDICCFFIGKDKVYVTHILNGCGLHADIGLTVLIERSLVKVEKNNKLAMHNLLREMGREIIREGSRKKLGKRSRLWFDEDVVEILTEKTGTEAIEGLALKLHSNKRYCFKADAFAEMKRLRLLQLDNVELTGDYRYLSKQLRWISWKGFSLKYIPKSFYLEGAIAIDLKHSSLRLVWKEPQVLQWLKFLNLSHSKYLKETPDFSKLPNLEKLILTDCSSLLKVHQSIGDLQNLLFINLKDCKSLSNLPRSIYKLKSLRTLILSGCSKIDTLDEDIMQMESLTTLIAENTAVKQVPFPIVSSKGIGYISIYGYEGFSHHVYLSIMRSWMLPKMNPLSCIRSFSGTSSSPIPMDMQNKNLSDLAPPISNFRSVVVQCETEIQLFNQIRTILDDVYGANFSELEITSYTSQSSNHSVKSYLIGIGDFEQVFISLSNSISEGLATCESSDVFLPGDYYPYWLAHTEKKGLKMENLSWGATMMC* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0774 925 SUPERFAMILY L domain-like 545 777 - -
Gso3g0774 925 PRINTS Disease resistance protein signature 219 234 - -
Gso3g0774 925 PRINTS Disease resistance protein signature 296 310 - -
Gso3g0774 925 PRINTS Disease resistance protein signature 389 403 - -
Gso3g0774 925 PRINTS Disease resistance protein signature 698 714 - -
Gso3g0774 925 Gene3D - 190 349 IPR027417 -
Gso3g0774 925 SUPERFAMILY "Winged helix" DNA-binding domain 425 531 IPR036390 -
Gso3g0774 925 Pfam NB-ARC domain 200 436 IPR002182 GO:0043531
Gso3g0774 925 SMART till_3 18 160 IPR000157 GO:0007165
Gso3g0774 925 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 908 - -
Gso3g0774 925 Gene3D - 354 438 IPR042197 -
Gso3g0774 925 Gene3D Ribonuclease Inhibitor 537 756 IPR032675 -
Gso3g0774 925 Gene3D - 11 188 IPR035897 -
Gso3g0774 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 449 IPR027417 -
Gso3g0774 925 Pfam TIR domain 19 185 IPR000157 GO:0007165
Gso3g0774 925 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 908 IPR044974 GO:0006952
Gso3g0774 925 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 163 IPR035897 -
Gso3g0774 925 ProSiteProfiles TIR domain profile. 17 186 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0774 Gso-Chr3 27912000 27916929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0774 8 744 WRKY Transcription Factor Family AT4G12020 29.801 7.63e-87 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0774 - - gmx:100815297 1266.14