Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0762 ATGGGTATCTCCAGAGATTCTATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCCTGGAGGAAAAAGAGAAAGTATGAGCTTGGTCGCCAGCCTGCTAACACTAAGCTGTCAAGCAACAAGACAGTCAGGAGGATCCGTGTTAGAGGTGGAAATGTGAAATGGAGGGCATTGAGATTGGATACTGGAAATTACTCCTGGGGAAGTGAAGCTGTAACTCGCAAGACTCGTGTACTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGTACTCAGACTCTTGTCAAAAGTGCTATCGTTCAGGTTGATGCTGCTCCATTCAAACAGTGGTATCTTCAGCACTATGGTGTTGAGATTGGTAGGAAAAAGAAGACAGCTGCCAAGAAGGAAACTGCAGAGGAGGGTGGTGATGCTGCTGCAGCTGCAGAAGAAGCCAAAAAGAGTAACCATGTGCAGAGAAAATTGGAGAAGCGCCAGAAAGATCGAAAGCTTGATGCTCACATTGAGGAGCAGTTTGGTGGTGGGCGTTTGCTTGCTTGCATTTCCTCTAGACCTGGTCAATGTGGCAGAGCTGATGGCTACATTCTGGAAGGTAAGGAGTTGGAGTTTTACATGAAAAAACTCCAGAAGAAGAAGGGAAAGGGTGCTGCTTGA 663 0.4706 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRVLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKTAAKKETAEEGGDAAAAAEEAKKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0762 220 PANTHER 40S RIBOSOMAL PROTEIN S8 1 220 - -
Gso3g0762 220 CDD Ribosomal_S8e_like 5 199 - -
Gso3g0762 220 Pfam Ribosomal protein S8e 5 199 IPR022309 -
Gso3g0762 220 Gene3D Ribosomal protein S8e, subdomain 109 178 IPR042563 -
Gso3g0762 220 Gene3D - 27 215 - -
Gso3g0762 220 MobiDBLite consensus disorder prediction 131 165 - -
Gso3g0762 220 MobiDBLite consensus disorder prediction 11 26 - -
Gso3g0762 220 MobiDBLite consensus disorder prediction 1 39 - -
Gso3g0762 220 TIGRFAM eS8: ribosomal protein eS8 1 201 IPR001047 GO:0003735|GO:0005840|GO:0006412
Gso3g0762 220 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Gso3g0762 220 PANTHER 40S RIBOSOMAL PROTEIN S8 1 220 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0762 Gso-Chr3 27299850 27302506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0762 1 208 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.173 1.42e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0762 K02995 - gmx:100794937 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0705 16 11049919 11052847 Gso3g0762 3 27299850 27302506 GST