Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0756 ATGGAAAGATATAAAATTTTGAGAGAGCTTGGGGATGGTTCTTGCGGTCATGTGTATAAAGCCCGTGATATGAGAACATATGAGATTGTCGCGGTCAAAAGGTTGAAAAGAAAGTTTTGTTTCTGGGAAGAATACACAAATTTAAGAGAAGTTATGATCCTCCGTAAAATGAATCACCCAAATATCATAAAGTTGAAAGAGGATTGTAATCTTTATCAATTAATAAAGGAGAGAGAAAAGCCCTTTTCAGAGGAAGAGATACGGTGCTTTATGAGGCAAGTGCTACAAGGACTTAGTCACATGCACAAGAAAGGATTCTTTCATCGGGATTTAAAACCTGAGAATATGCTGGTAACAAATGATGTTTTGAAAATTGCTGATTTTGGACTGGCTAGAGAAGTATCATCGATGCCTCCATATACTCAATATGTTTCCACACGGTGGTATCGAGCTCCAGAAGTTTTGTTGCGAGCCCCTTGTTATACTCCTGCTGTTGACATGTGGGCAGTTGGTGCTATATTAGCTGAGCTTTTTACTTTGACCCCCATATTTCCTGGTGAAAGTGAAATAGATCAACTGTACAAAATATACGGCATTCTTGGTATGCCAGATTCCACTGCTTTCACCATAGGGGCAAGCAACTCTCAGTTATTGGACATAGTTGCTCATGAAGTTGTTCCGCCTGTGAAGCTTTCTAATATTATTCCGAATGCTAGTTTGGAAGCTATAGACTTGATCACACAACTGTTACATTGGGACCCATCAAGAAGGCCAGATGCAGATCAGTCATTGCAACATCCATTTTTCCATGTGGATGCATGGGTTCCTTGTCCGCCCAGTGATCCACTTGAGCTGAAGCTGAGTAGCAAGAGGGCAAAGCCAAATCTTGAGCTGAAACTGCAGGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGCTTGACTTTAGGTGTAAAGCCTAGTGTTTCAAACTCAGATGTGGTCCAAAATGTATCTCAGGGTGTCAGAGAGAATGTGCTATTTTGCTCAGATTTCAATGATCATTCAGACCAGTCAGTATTTTGGACATTATTATCTCCTGATCAAAATGGAATTCATAACTCAGCAGAGACTTCGTTGTCATTGTCATTCAGTCCAGTTCAACATCCGCCAATTGGAGTTCCACAGTCTGTGGGATTTTCTTTTCAGCCTTTGCAGCCTAACATCTTAACCTCACCATTTTTGGCTCTCTCTTCTCCCTTCCAGCGCGGCCACTGCCTTTGA 1263 0.4141 MERYKILRELGDGSCGHVYKARDMRTYEIVAVKRLKRKFCFWEEYTNLREVMILRKMNHPNIIKLKEDCNLYQLIKEREKPFSEEEIRCFMRQVLQGLSHMHKKGFFHRDLKPENMLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLRAPCYTPAVDMWAVGAILAELFTLTPIFPGESEIDQLYKIYGILGMPDSTAFTIGASNSQLLDIVAHEVVPPVKLSNIIPNASLEAIDLITQLLHWDPSRRPDADQSLQHPFFHVDAWVPCPPSDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLGVKPSVSNSDVVQNVSQGVRENVLFCSDFNDHSDQSVFWTLLSPDQNGIHNSAETSLSLSFSPVQHPPIGVPQSVGFSFQPLQPNILTSPFLALSSPFQRGHCL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0756 420 SUPERFAMILY Protein kinase-like (PK-like) 1 271 IPR011009 -
Gso3g0756 420 Gene3D Transferase(Phosphotransferase) domain 1 72 273 - -
Gso3g0756 420 CDD STKc_MAK_like 4 269 - -
Gso3g0756 420 PANTHER CYCLIN-DEPENDENT KINASE F-4 1 292 - -
Gso3g0756 420 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 292 - -
Gso3g0756 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Gso3g0756 420 SMART serkin_6 4 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0756 420 Pfam Protein kinase domain 4 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0756 420 Gene3D Phosphorylase Kinase; domain 1 1 71 - -
Gso3g0756 420 ProSiteProfiles Protein kinase domain profile. 4 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0756 Gso-Chr3 27022384 27033019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0756 7 269 MAP Kinase Gene Family AT4G01370 36.140 1.14e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Gso3g0756 Pkinase 4.7e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0756 K08829 K08830 gmx:100792842 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0713 16 11307866 11319179 Gso3g0756 3 27022384 27033019 GST