Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0735 ATGGCTGAATCATTTCTCTTCAGCATCGCTGAGTCTCTCATAACAAAGCTTGCTTCTCATGCTTTCCAAGAAGCTTCTCGGGTGGTGGGTTTGTACGACCATCTCCGAGACCTTAAAAAGACTCTCTCATTAGTCAAGGCAGTGCTGTTAGATGCCGATCAAAAGCAGGAGCATAACCATGAGCTGCAGGAATGGCTGAGGCAGCTCAAAAGTGTCTTCTATGATGCCGAAGATGTGTTGAATGAATTTGAGTGCCAAACACTGCGAAAGCAAGTGCTCAAAGCTCATGGTACCATCAAAGACGAGGTAAGCCACTTCTTCTCAAGTTCTAATCCACTTGTTTTTCGTTCCAAGATGGCTCAACAAATCAAAGATGTCAGCAAGAGGCTAGACAAGGTTGCAGCTGATAGGCATAAGTTTGGTCTCCGAATAATTGATGTTGACACACGAGTAGTTCATAGGAGAGACACGAGTCGCATGACACACTCCCGTGTGAGTGACTCGGATGTGATAGGAAGGGAACATGATAAAGAAAAGATCATAGAGCTTTTGATGCAGCAGAATCCCAATGATGATGATAAAAGTCTCTCTGTTATCCCCATTGTAGGGATTGGAGGTTTGGGAAAAACTACACTTGCACAGTTTGTGTTTAATGATAAGAGGATATATGAGTGTTTCTCATTGAAGATGTGGGTGTGTGTTTCTGATGACTTTGACATTAACCAACTCATTATGAAAATCATCAATTCTGCTAATGATGCTAATGCTCCTTTTCGCCAACAGAATTTAAACATGGTCGATCTGGAGCAATTACAAAATCAATTGAGAAGCAAACTTGCCGGTAAAAAATTCTTACTTGTCTTGGATGACGTATGGAATGATGACCGTGTTAAATGGGTTGAGTTGAGGAATTTAATACAAGAAGGGGTTGCAGGAAGTAAAATTCTAGTGACTACACGTATTGATTCCATTGCTTCCATGATGGGAACTGTTACCTCTCACAAGTTACAAAGACTTTCTTCGGAGAATTCATTGTCTCTTTTTGTCAAATGGGCATTTAAAGAAGGCGAAGAGCAAAAACATCCTCATTTGGTAAATATCGGGAAAGAAATTGTGAAAAAATGCAGAGGGATTCCATTGGCTGTGAGAACATTGGGGAGTTCACTATTTTCAAAGTTTGAGGCAAATGAGTGGGAATGTGTGAGAGACAATGAAATTTGGAATTTGCCACAAAAAAAAGATGACATTTTACCTGCACTTAAGTTAAGTTATGATTTCTTGCCCTCCTATTTGAGGCAATGTTTTGCATTATTTTCGCTTTACCCAAAGGATTATGAATTTCGTAGTTTTGAGGTAGTTAGGCTTTGGGGTGCACTTGGTGTCCTTGCATCACCCAGAAAAAATGAGACACTGGAAGATGTTGTCAAACAGTATCTGGATGAATTACTCTCAAGATCTTTCCTTCAAGATTTTATCGATTGTGGCACTTTTTATCAATTTAGAATTCATGATTTGGTGCATGATCTTGCTGTATTTGTTACAAAAGAGGAGTGTCTACTTGTAAATTCCCACATTCAAAATATTCCTGAGAATATTCGGCATCTGTCTTTTGCTGAATACAGTTGTCTTGGAAATTCATTCACCTCAAAATCGGTAGTTGTGAGAACCATAATGTTTCCAAATGGTGCAGAAGGAGGCAACGTTGAATCTTTGCTAAATACCTGTGTGTCAAAGTTCAAATTATTGCGAGTTTTGGATTTAAGTTATTCGACATGCAAGACTTTGCCCCGTTCCATTGGTAAGTTGAAACACTTGAGATATTTCAGCATTGAGAATAATCGCAATATCAAGAGACTCCCCAATTCTATTTGCAAACTCCAAAATTTGCAATTGTTGAGTGTTCGGGGATGCAAGAAGCTGAAAGCATTGCCCAAAGCATTAAGAAAATTGATTAGTCTTCGGCATTTGAAGATAACTACAAAGCAACCTGTTTTGCCTTACAGTGAGATTACCAACTTGATCACGCTTGCACATCTGTATATTGCATCAAGCCATAATATGGAGTCTATCCTTGGAGGGGTGAAGTTCCCTGCTCTTAAAACATTGTATGTTGTTGACTGTCACAGTCTGAAGTCTTTGCCACTGGATGTTACAAATTTTCCTGAATTAGAAACTCTATTTGTTGTAGACTGTGTTAATCTGGACTTGGAACTGTGGAAGGACGACCATGAAGAACAAAACCCCAAGTTGAAGTTAAAATATGTTGCATTCTGGGGTTTACCACAGCTGGTGGCCTTACCTCAATGGCTTCAAGAAACTGCCAACTCCTTACAGACCTTGTTCATTAAAAACTGCGACAATCTTGAAATGCTTCCGGAGTGGCTGTCAACTCTGACTAATCTTAAAGCACTTGAAATATCAGATTGTCCAAAGCTTATATCTCTCCCGGATAACATCCATCACCTCACCGCACTTGAAAGGTTGAGAATTGTCGGTTGTCCTGAACTGTGTAGAAAATGCCAGCCACATGTCGGGAATTATGATAATTGGTGTCGTCGCATGAAAGCCTTGTTAGGTTCTCAAGATGCATGGGAGATTGTAGAGAAAGATGGTCACGTGACACTCAGTGACCTCACTCGCGTTACTGTGGACCTCACTCGCGTTTCAGACCTCACCGATGACCTAGCTTCTTCGCTCAGTTGCCCTACACAACTTTCATCACTGCTTCAGTCACCTCTTCGGTACTCTCCCTTCCGCGTCGACAAGCACACCCCATGA 2778 0.4071 MAESFLFSIAESLITKLASHAFQEASRVVGLYDHLRDLKKTLSLVKAVLLDADQKQEHNHELQEWLRQLKSVFYDAEDVLNEFECQTLRKQVLKAHGTIKDEVSHFFSSSNPLVFRSKMAQQIKDVSKRLDKVAADRHKFGLRIIDVDTRVVHRRDTSRMTHSRVSDSDVIGREHDKEKIIELLMQQNPNDDDKSLSVIPIVGIGGLGKTTLAQFVFNDKRIYECFSLKMWVCVSDDFDINQLIMKIINSANDANAPFRQQNLNMVDLEQLQNQLRSKLAGKKFLLVLDDVWNDDRVKWVELRNLIQEGVAGSKILVTTRIDSIASMMGTVTSHKLQRLSSENSLSLFVKWAFKEGEEQKHPHLVNIGKEIVKKCRGIPLAVRTLGSSLFSKFEANEWECVRDNEIWNLPQKKDDILPALKLSYDFLPSYLRQCFALFSLYPKDYEFRSFEVVRLWGALGVLASPRKNETLEDVVKQYLDELLSRSFLQDFIDCGTFYQFRIHDLVHDLAVFVTKEECLLVNSHIQNIPENIRHLSFAEYSCLGNSFTSKSVVVRTIMFPNGAEGGNVESLLNTCVSKFKLLRVLDLSYSTCKTLPRSIGKLKHLRYFSIENNRNIKRLPNSICKLQNLQLLSVRGCKKLKALPKALRKLISLRHLKITTKQPVLPYSEITNLITLAHLYIASSHNMESILGGVKFPALKTLYVVDCHSLKSLPLDVTNFPELETLFVVDCVNLDLELWKDDHEEQNPKLKLKYVAFWGLPQLVALPQWLQETANSLQTLFIKNCDNLEMLPEWLSTLTNLKALEISDCPKLISLPDNIHHLTALERLRIVGCPELCRKCQPHVGNYDNWCRRMKALLGSQDAWEIVEKDGHVTLSDLTRVTVDLTRVSDLTDDLASSLSCPTQLSSLLQSPLRYSPFRVDKHTP* 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0735 925 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 437 IPR027417 -
Gso3g0735 925 CDD RX-CC_like 2 134 IPR038005 -
Gso3g0735 925 Pfam NB-ARC domain 173 425 IPR002182 GO:0043531
Gso3g0735 925 Pfam Rx N-terminal domain 11 101 IPR041118 -
Gso3g0735 925 PRINTS Disease resistance protein signature 198 213 - -
Gso3g0735 925 PRINTS Disease resistance protein signature 278 292 - -
Gso3g0735 925 PRINTS Disease resistance protein signature 375 389 - -
Gso3g0735 925 PRINTS Disease resistance protein signature 796 812 - -
Gso3g0735 925 Gene3D - 423 511 IPR036388 -
Gso3g0735 925 Gene3D Ribonuclease Inhibitor 555 916 IPR032675 -
Gso3g0735 925 PANTHER DISEASE RESISTANCE PROTEIN RP 6 790 IPR044974 GO:0006952
Gso3g0735 925 SUPERFAMILY L domain-like 501 842 - -
Gso3g0735 925 Gene3D - 338 422 IPR042197 -
Gso3g0735 925 Gene3D - 10 124 - -
Gso3g0735 925 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 790 - -
Gso3g0735 925 Pfam Domain of unknown function (DUF4219) 846 868 IPR025314 -
Gso3g0735 925 Gene3D - 153 333 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0735 Gso-Chr3 24874122 24878766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0735 582 684 WRKY Transcription Factor Family AT4G12020 33.654 1.47e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0735 - - gsj:114406329 1817.74