Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0729 ATGGAGTTCGAGGACCGCTTCAGACACCAGGCTCAGAGACCAAAATATGACTGCCTTCTTTTTGATTTAGATGACACTTTGTATCCCCTCAAATCTGGTCTTGCAAAATCATGTCTCCAAAATATTAAAGACTACATGGTTGAGAAGCTTGGCATACACCCTAGCAAAATTGATGACTTGTCCAACCTCCTTTACAAGAATTATGGAACAACTATGGCTGGTCTAAGGGCAATTGGATATGACTTTGACTATGATGAATATCACAGTTTTGTTCATGGAAGATTACCTTATGAGAACCTAAAACCAGACCAAGTTCTGAGGAACCTGTTGCTGAGCCTACCCTATAGAAAACTTATCTTCACAAACGCAGACAAAGTTCACGCGGCGAAGGCGCTTAACAGGCTTGGATTAGAAGACTGCTTTGAAGGAATCATATGCTTTGAGACCCTTAATCCCATCCACAAGAGCATTGTTTCTGATGATGAAGATGACATTGAGTTTGTAGGTTCAAGAACCACCAATCCAACCACCACTTGTAATGGTTCAGGCACCTCTCAAATCTTTGACATCATAGGGCATTTTGCTCAGCTCAATCCCAGTGCAGTCTTGCCAAAGACACCAATTGTTTGCAAGCCATCAGAAAATGCCATTGAACTGGCCCTCAATATAGCCAATCTTAACCCACAGAGAACTTTGTTCTTCGAGGACAGTACCCGCAACATACAAGCTGGAAAACGTGTGGGGCTTCACACTGTGCTGGTTGGTACATCACAAAGATGTAAAGGTGCAGATTATGCTTTGGAAAGCATTCACAACCTTAGGGAGGCTGTGCCTGAACTATGGGAGGCTGATATAAAATCAGAAGCTGCATACCCTGGAAAGCTAGCTGTGGAGACATCAGTCACAGCTTGA 912 0.432 MEFEDRFRHQAQRPKYDCLLFDLDDTLYPLKSGLAKSCLQNIKDYMVEKLGIHPSKIDDLSNLLYKNYGTTMAGLRAIGYDFDYDEYHSFVHGRLPYENLKPDQVLRNLLLSLPYRKLIFTNADKVHAAKALNRLGLEDCFEGIICFETLNPIHKSIVSDDEDDIEFVGSRTTNPTTTCNGSGTSQIFDIIGHFAQLNPSAVLPKTPIVCKPSENAIELALNIANLNPQRTLFFEDSTRNIQAGKRVGLHTVLVGTSQRCKGADYALESIHNLREAVPELWEADIKSEAAYPGKLAVETSVTA* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0729 303 SFLD Haloacid Dehalogenase 10 283 - -
Gso3g0729 303 Pfam Haloacid dehalogenase-like hydrolase 211 254 IPR041492 -
Gso3g0729 303 Gene3D - 83 281 IPR023214 -
Gso3g0729 303 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 303 - -
Gso3g0729 303 SUPERFAMILY HAD-like 15 281 IPR036412 -
Gso3g0729 303 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 207 254 IPR006439 -
Gso3g0729 303 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 303 - -
Gso3g0729 303 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 17 254 IPR010237 -
Gso3g0729 303 SFLD C1.5.3: 5'-Nucleotidase Like 10 283 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0729 Gso-Chr3 24671630 24675301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0729 K07025 - gmx:100787007 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0729 3 24671630 24675301 Gso3g0729 3 24671630 24675301 ECH
Gso3g0729 3 24671630 24675301 Gso11g1239 11 11287729 11310133 ECH