Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0721 ATGAAGGAGAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTATTACGTTCTTATGTCAAACAGTATGGTCCTAGGGAATGGAATCTTGTGTCTCAGCGCATGAACACATATCTTAACAGGGATGCTAAGTCGTGCTTGGAGAGGTGGAAGAACTACCTCAAGCCTGGCATCAAAAAAGGCTCTCTTACCGAAGAAGAGCAGCGCCTTGTCATCCACCTTCAAGCAAAATATGGAAACAAATGGAAGAAAATCGCTGCTGAAGTCCCAGGGCGCACTGCTAAGCGGTTAGGCAAGTGGTGGGAAGTCTTCAAAGAGAAGCAGCAGAGAGAGAAAAAGGAGATCAATAGAATTGCCGACCCAATTAACAATAGTAAGTACGAGCACATACTCGAGAGTTTTGCAGAGAAACTAGTTAAGGAACGCCCTTCACCATCATTTGTCATGGCTGCTTCCGATGGGGCATTTCTGCTCACTGATACACCAGCACCTGCATCTTCCTTGCGTCCTTCTTGGCTTTCCAATTCTAGTAGTGCTGCAGCCATCGGCCCAAGTTCCCTTTCTGTGAAACTAAGTCTTTCTTCCTCAACGGTGGCCACACCTCCATTTTCATGGTTGCCACCCGAGAGAGGACCAGACAATGCTCCTTTTGTTTTGGGGAATGTATCAGCGCTTCATGGAGCTATTCCAACTCTAAGTGATAGCATGCATATGTCTCAGATGGTGGAGCACTGTAAAGAGTTGGAAGAGGGGCATCGTGCTTTGGCCACGCACAAGAAGGAGGCAGCTTGGAGGTTAAGTCGGGTGGAGTTACAGTTGGAGTCAGAGAAGGCCAACCGAAGAAGGGAGAAGATTGAAGAATTTGAAGCAAAGATTAAAGCTCTTCAGGAAGAGGAGAAAGCTGCTTTAGGTAGAATTGAAGCAGAATACAGAGAACAGTTAGCTGCATTGAGGAGAGATGCTGAAAACAAGGAGCAAAAGTTGGCAGAACAATGGGATGCAAAGCATTTACGGTTTACTAGGTTACTAGAGCAATTAGGATGCAGAGCAGGGCTCCTTGAGCCAAATGCAAGATGA 1074 0.4655 MKERQRWRAEEDALLRSYVKQYGPREWNLVSQRMNTYLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIHLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKEINRIADPINNSKYEHILESFAEKLVKERPSPSFVMAASDGAFLLTDTPAPASSLRPSWLSNSSSAAAIGPSSLSVKLSLSSSTVATPPFSWLPPERGPDNAPFVLGNVSALHGAIPTLSDSMHMSQMVEHCKELEEGHRALATHKKEAAWRLSRVELQLESEKANRRREKIEEFEAKIKALQEEEKAALGRIEAEYREQLAALRRDAENKEQKLAEQWDAKHLRFTRLLEQLGCRAGLLEPNAR* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0721 357 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Gso3g0721 357 PANTHER TRANSCRIPTION FACTOR AS1 1 357 IPR031055 GO:0005634|GO:0006351|GO:0010338
Gso3g0721 357 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 357 - -
Gso3g0721 357 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Gso3g0721 357 CDD SANT 6 53 IPR001005 -
Gso3g0721 357 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Gso3g0721 357 SMART sant 3 55 IPR001005 -
Gso3g0721 357 SMART sant 58 106 IPR001005 -
Gso3g0721 357 Gene3D - 4 58 - -
Gso3g0721 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Gso3g0721 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Gso3g0721 357 Coils Coil 265 330 - -
Gso3g0721 357 CDD SANT 63 104 IPR001005 -
Gso3g0721 357 Gene3D - 62 127 - -
Gso3g0721 357 Pfam Myb-like DNA-binding domain 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0721 Gso-Chr3 23914949 23918025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0721 1 348 MYB Transcription Factor Family AT2G37630 62.398 2.84e-144 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso3g0721 Myb_DNA-bind_6 1.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0721 K09422 - gmx:100101908 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0721 3 23914949 23918025 Gso3g0721 3 23914949 23918025 ECH