Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0716 ATGGCGACCCCCCCAAACGACGCCGCATCGACGAAGAAGCCACAACCCATCCCTTGGACCCACCAGGAGACCGTGCACCTCATCCGCGCCTACCAGGAGAAGTGGTACGCCCTCAAGCGGGGCCCACTGCGCCACAACCAGTGGGAGGAGGTCGCCGTCGTCGTCGCCGCACGCTGCGGCTACGACCTTGCCCACCCCGCCAAGTCCGCCCTTCAGTGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCATCGCGCCGAGAAGAAACAACAACACTCCGCCGCCGACGCGCTCCGCCCCGGCGCGTGGCAGTACAACGCCCTCATGGATGACCTTGAGCGCGGCCCCCTCCCCATCTCCGCCCTTGCTCCTCTATACAGCGACGAAGAAGAAGACGAAGACGACGACGACGCCATCGACGATCAATACGACAATGATGGCGACGAGGGTTTCATTAACATCAAGTCGAAGAGTATTAACTGTATCCTCAGCGAGAGACCTGTGAGAATGAGAAGCAACGACAGAGGGTTTTTGAGAGAGCACGTTGTTGTTGTTGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAATGAGAATGAAGACGACGATGTTTTGGGGTTGTCGATGGAGATGAGGGTTTTCGCGGAGAGGTTTATTGGGATGGAGAGTTTGAAGATGGAGATGATGAAGGAGACGGAGCGGTGTAGGTTGGAGATGGAGAAGAAGCGGATCCAGATGATTCTGGAATCACAAAGGAGGATCGTTGATTCCATTGGTAAGGCGTTTGGGTCTAGCAAGAGGATCAAGATTACTCAACAAAACTGA 843 0.5611 MATPPNDAASTKKPQPIPWTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVAARCGYDLAHPAKSALQCRHKMEKLRQRHRAEKKQQHSAADALRPGAWQYNALMDDLERGPLPISALAPLYSDEEEDEDDDDAIDDQYDNDGDEGFINIKSKSINCILSERPVRMRSNDRGFLREHVVVVEEEEEEEEEEEEEEEEENENEDDDVLGLSMEMRVFAERFIGMESLKMEMMKETERCRLEMEKKRIQMILESQRRIVDSIGKAFGSSKRIKITQQN* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0716 280 MobiDBLite consensus disorder prediction 127 147 - -
Gso3g0716 280 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 276 IPR044823 -
Gso3g0716 280 ProSiteProfiles Myb-like domain profile. 18 81 IPR001005 -
Gso3g0716 280 Coils Coil 178 209 - -
Gso3g0716 280 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 10 276 - -
Gso3g0716 280 MobiDBLite consensus disorder prediction 127 150 - -
Gso3g0716 280 Gene3D - 19 86 - -
Gso3g0716 280 MobiDBLite consensus disorder prediction 184 210 - -
Gso3g0716 280 Pfam Myb/SANT-like DNA-binding domain 18 111 IPR044822 -
Gso3g0716 280 MobiDBLite consensus disorder prediction 185 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0716 Gso-Chr3 23443359 23446989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0716 19 88 Trihelix Transcription Factor Family AT3G14180 31.429 2.71e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso3g0716 Myb_DNA-bind_4 2.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0716 - - gmx:100814846 495.352