Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0701 ATGGGTTCGCTAACTCAAGTTAATTACTTGATTTTTTTGCTCATACTTTCCAGCTTCTATTTTGGTATAATCTCTGTGAATGATACCATCACATCAACCAGATTCATCAGGGACCCTGAGGCTATAATCTCAAGCAATGGTGACTTCAAGCTCGGATTCTTCAGCCCTGAAAAATCCACAAATCGCTATGTGGCAATCTGGTATCTCTCTGAAACCTACATCATATGGATAGCCAATAGAGACCAACCACTTAATGATTCATCTGGGGTGTTCCAAATTCACAAGGATGGGAATCTTGTGGTAATGAATCCACAAAATAGGATCATATGGTCAACAAATGTGTCAATCATTGCTACCAATACAAGTGCTCAACTTGATGATTCCGGAAATCTGATCCTGCGTGATGTTTCAGATGGAAAAATACTATGGGACAGTTTCACACACCCTGCTGATGTTGCAGTGCCATCGATGAAGATTGCTGCCAACAGGCTCACAGGCGAGAAAATTGCATATGTGTCATGGAAAAGCAGTTCTGATCCTTCTTCTGGATACTTCACCGGGAGCCTTGAACGCTTGGATGCTCCAGAAGTGTTTTTTTGGTTCAACAAAACAAAGCCATATTGGAGAACTGGTCCATGGAATGGAAGGGTCTTCCTTGGATCACCAAGGATGTTAACTGAGTACCTATATGGCTGGCGTTTTGAGCCTAATGATAATGGAACAGCTTATCTAACCTACAATTTTGAAAATCCCTCTATGTTTGGAGTCCTGACCATAACTCCACATGGCACACTTAAATTGGTAGAGTTTTTGAACAAAAAGATATTTCTAGAACTTGAGGTGGACCAAAATAAATGTGACTTTTATGGGACATGTGGGCCTTATGGAAGCTGTGATAACTCAACTTTACCGATTTGCAGCTGTTTTGAAGGGTTTAAGCCCAGCAATCTTGATGAATGGAACAGGGAAAATTGGACTAGTGGGTGTGTGAGGAATATGCAACTGAACTGTGACAAGTTGAATAATGGGAGTGATGTTCAACAAGATGGGTTTTTGGAGTACCATAACATGAAAGTGCCTGACTTTGCAGAGAGATCAATAAATGGAGACCAAGACAAATGCAGAGCAGATTGCTTAGCAAATTGCTCTTGCTTGGCCTACGCATATGATTCTTACATTGGTTGCATGTTTTGGAGTAGGGACTTGATTGATTTGCAGAAATTTCCAAATGGAGGGGTTGATCTCTTCATTCGCGTGCCAGCACAACTTCTAGTTGTAGGAAATCAGCCTCAAAACTTGATTACTGGTGACCAAAAACAAATTAAACTGGAAGAGCTGCCTCTATTTGAATTTGAAATGCTAGCAACTGCTACAAATAACTTTCACTTGGCCAATATGCTTGGCAAGGGAGGTTTTGGTCCAGTATACAAGGGGCAATTGGATAACGGACAAGAAATTGCTGTAAAAAGACTTTCAAAAGCATCTGGACAAGGATTGGAAGAATTTATGAATGAAGTAGTAGTGATTTCTAAACTTCAACATCGCAATCTTGTAAGACTTCTTGGTTGTTGTATAGAACGAGACGAACAGATGTTGGTATATGAGTTTATGCCAAATAAAAGTTTGGATTCGTTTCTCTTTGATCCACTCCAAAGGAAAATACTAGATTGGAAAAAACGCTTCAACATAATTGAAGGAATAGCTCGAGGAGTACTTTATCTTCATCGAGACTCAAGACTAAGGATTATACATAGAGATCTTAAAGCAAGCAACATCTTACTAGATGATGAGATGAATCCCAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAGAGGCGGCGATGATGATGAAGCTAACACGAAAAGGGTTGTTGGAACTTATGGTTATATGCCGCCTGAGTATGCAATGGAGGGAATTTTCTCAGAAAAATCGGATGTTTATAGCTTTGGAGTGTTATTGCTAGAAATTGTAAGCGGACGAAGAAACACCAGCTTTTATAACAATGAGCAATCACTTAGCCTTGTTGGATATGCATGGAAACTATGGAATGAAGACAACATTATGTCTATAATAGATCCTGAGATACATGATCCAATGTTCGAAAAGAGTATATTGAGGTGCATACATATAGGACTTCTATGTGTGCAAGAACTTACAAAAGAAAGACCCACAATATCCACTGTGGTTTTGATGCTCATAAGTGAGATTACACATCTTCCTCCTCCAAGACAAGTTGCATTTGTTCAGAAACAAAATTGTCAAAGTTCAGAGTCTTCTCAGAAAAGCCAATTTAACTCAAACAACGATGTAACTATAAGTGAAATTCAAGGTAGATAA 2340 0.3906 MGSLTQVNYLIFLLILSSFYFGIISVNDTITSTRFIRDPEAIISSNGDFKLGFFSPEKSTNRYVAIWYLSETYIIWIANRDQPLNDSSGVFQIHKDGNLVVMNPQNRIIWSTNVSIIATNTSAQLDDSGNLILRDVSDGKILWDSFTHPADVAVPSMKIAANRLTGEKIAYVSWKSSSDPSSGYFTGSLERLDAPEVFFWFNKTKPYWRTGPWNGRVFLGSPRMLTEYLYGWRFEPNDNGTAYLTYNFENPSMFGVLTITPHGTLKLVEFLNKKIFLELEVDQNKCDFYGTCGPYGSCDNSTLPICSCFEGFKPSNLDEWNRENWTSGCVRNMQLNCDKLNNGSDVQQDGFLEYHNMKVPDFAERSINGDQDKCRADCLANCSCLAYAYDSYIGCMFWSRDLIDLQKFPNGGVDLFIRVPAQLLVVGNQPQNLITGDQKQIKLEELPLFEFEMLATATNNFHLANMLGKGGFGPVYKGQLDNGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIERDEQMLVYEFMPNKSLDSFLFDPLQRKILDWKKRFNIIEGIARGVLYLHRDSRLRIIHRDLKASNILLDDEMNPKISDFGLARIVRGGDDDEANTKRVVGTYGYMPPEYAMEGIFSEKSDVYSFGVLLLEIVSGRRNTSFYNNEQSLSLVGYAWKLWNEDNIMSIIDPEIHDPMFEKSILRCIHIGLLCVQELTKERPTISTVVLMLISEITHLPPPRQVAFVQKQNCQSSESSQKSQFNSNNDVTISEIQGR* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0701 779 CDD PAN_AP_plant 334 420 - -
Gso3g0701 779 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 180 IPR036426 -
Gso3g0701 779 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 424 - -
Gso3g0701 779 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 433 778 - -
Gso3g0701 779 CDD STKc_IRAK 467 733 - -
Gso3g0701 779 SMART blect_4 33 149 IPR001480 -
Gso3g0701 779 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 17 424 - -
Gso3g0701 779 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 433 778 - -
Gso3g0701 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Gso3g0701 779 Gene3D Transferase(Phosphotransferase) domain 1 537 741 - -
Gso3g0701 779 MobiDBLite consensus disorder prediction 757 779 - -
Gso3g0701 779 CDD B_lectin 33 149 IPR001480 -
Gso3g0701 779 Gene3D - 22 148 IPR036426 -
Gso3g0701 779 Gene3D Phosphorylase Kinase; domain 1 435 536 - -
Gso3g0701 779 SMART serkin_6 461 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0701 779 Pfam PAN-like domain 347 405 IPR003609 -
Gso3g0701 779 SUPERFAMILY Protein kinase-like (PK-like) 446 752 IPR011009 -
Gso3g0701 779 ProSiteProfiles Protein kinase domain profile. 461 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0701 779 PIRSF SRK 2 432 IPR024171 GO:0004674
Gso3g0701 779 PIRSF SRK 425 779 IPR024171 GO:0004674
Gso3g0701 779 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Gso3g0701 779 Pfam D-mannose binding lectin 74 175 IPR001480 -
Gso3g0701 779 Pfam Protein tyrosine and serine/threonine kinase 462 730 IPR001245 GO:0004672|GO:0006468
Gso3g0701 779 ProSiteProfiles PAN/Apple domain profile. 337 420 IPR003609 -
Gso3g0701 779 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Gso3g0701 779 SMART ntp_6 346 419 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0701 Gso-Chr3 21608986 21637272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0701 449 779 Receptor kinase-like Gene Family AT4G11530 56.509 1.37e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso3g0701 PK_Tyr_Ser-Thr 6.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0701 - - gmx:100786846 1536.16