Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0687 ATGCCTTCCTCTTCCACCACCATAGTCTCCAAATGCGTGATCCACCCCGACTCGAAATCAAACATGAAACCCTTGAGACTCTCTGTTTCTGACCTTCCAATGTTGTCATGTCACTACATCCAAAAGGGCGTGTTACTCACCGCCCCGCCCTCCTCTTTTGACGACTTAATACTTTCTTTTAAACACACTCTTTCTATCGCGCTCTCTCACTTTCCCGCTCTCGCGGGAAGGTTTGAGACCGATTCCAACGGTTACGTTAATATTGTATGCAACGACGCTGGCGTTGATTTTATTCATGCTAAAGCAAAACACCTGACTTTAAACGCCGTCGTTTCGCCGTCCCTCGTTGATGTTCACCCTTGCTTCAAGGAGGAGTTTTTTGCTTACGACATGACTATCTCCTACGCCGGCCACAACACACCCCTCGCCGCCGTCCAGGTGACGGAACTCGCCGACGGAGTTTTCGTCGGCTGCACCGTCAACCACTCCGTCACCGACGGCACCTCGTTTTGGCACTTCTTCAACACCTTTGCCGCCGTCACCAAAGGCGGCGCCGCCAAAAAAGTCCTCCGAGCACCGGACTTTACTCGCGACACCGTCTTCAACTCCGCCGCCGTCCTCACCGTCCCCTCCGGCGGCCCCGCCGTCACGTTTGACGTAAACCAGCCACTCCGGGAACGCGTCTTCCACTTCTCCCGCGAAGCAATTCAGAAACTCAAGCAAAGAGCCAACAACACCGTCAACAACGAACTAACGGAAGTTATGGGAAAACAAGTAAACGACGGTTGGAAAATCGTTAACGGTAACGGAAAAATTAACGGTAACGGAAGAAACGAGATCTCGTCGTTTCAGTCGTTATCAGCTCAGCTCTGGCGAGCGGTGACACGTGCGAGGAAATTCAACGACCCAGCAAAAACGTCGACGTTTCGGATGGCGGTGAATTGCCGCCACCGTCTAGAGCCAAAGATGGACGCGTTGTACTTCGGCAATGCGATCCAGAGCATCCCGACGGTGGCTACCGTCGGAGAAATCCTCTCGCGCGATCTGCGCTTCTGCGCAGATCTTCTGCACCGTAACGTCGTCGCGCACGATGACGCTACGGTGCGCCGCGGCATAGAGGATTGGGAGAGCGCGCCGAGGCTGTTTCCCCTCGGAAACTTCGACGGCGCGATGATCACCATGGGAAGCTCTCCACGTTTTCCCATGTACGACAACGACTTCGGTTGGGGTAGACCTGTTGCGATTCGGAGTGGGAAAGCGAACAAGTTCGACGGAAAGATTTCCGCGTTTCCAGGGAGAGAGGGAAACGGCAGCGTCGATTTGGAGGTCGTTTTGGCCCCGGCCACCATGGCGGGGCTCGAAAACGACATGGAGTTTATGCAATACGTAACGCAGGTCGTTTGA 1404 0.5434 MPSSSTTIVSKCVIHPDSKSNMKPLRLSVSDLPMLSCHYIQKGVLLTAPPSSFDDLILSFKHTLSIALSHFPALAGRFETDSNGYVNIVCNDAGVDFIHAKAKHLTLNAVVSPSLVDVHPCFKEEFFAYDMTISYAGHNTPLAAVQVTELADGVFVGCTVNHSVTDGTSFWHFFNTFAAVTKGGAAKKVLRAPDFTRDTVFNSAAVLTVPSGGPAVTFDVNQPLRERVFHFSREAIQKLKQRANNTVNNELTEVMGKQVNDGWKIVNGNGKINGNGRNEISSFQSLSAQLWRAVTRARKFNDPAKTSTFRMAVNCRHRLEPKMDALYFGNAIQSIPTVATVGEILSRDLRFCADLLHRNVVAHDDATVRRGIEDWESAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPVAIRSGKANKFDGKISAFPGREGNGSVDLEVVLAPATMAGLENDMEFMQYVTQVV* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0687 467 Gene3D - 222 460 IPR023213 -
Gso3g0687 467 Pfam Transferase family 6 460 - -
Gso3g0687 467 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 464 - -
Gso3g0687 467 SUPERFAMILY CoA-dependent acyltransferases 60 183 - -
Gso3g0687 467 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 464 - -
Gso3g0687 467 Gene3D - 6 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0687 Gso-Chr3 21019993 21022044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0687 53 455 Monolignol Biosynthesis Gene Families AT5G48930 26.942 3.56e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0687 - - gmx:100804321 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0687 3 21019993 21022044 Gso3g0687 3 21019993 21022044 ECH
Gso1g0949 1 38487395 38489403 Gso3g0687 3 21019993 21022044 GST