LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso3g0658	ATGGATGTTGAATTGGTAGGTGGTGCATCCCTCTATGCATTCCTTCAAATTGTTTTGGACAAGCTAGCTTCAACTGAGGTCGTCAATTTGATCCGTGGAGAGAAGAAGTTGCTTCAAAAGTTGAAGACCACTCTCATAAAGGTTGGTGCTGTGCTTGATGATGCTGAGAAGAAACAGATCGCTCATGACCGCAGGGTCAATAACTGGCTCAATGATATCAAAAATGCTGTCTATGAAGTCGATGATTTGCTTGATGAACTTTCTACCAAAGCTGTCACTCAAAAGCAGGTAAGCAACTGGTTTTCCCACTTTTTGAATAATAAGAAGATGGCTAGTAAGTTAGAAGACATAGTTGACAGATTAGAGTATCTTTTAGAACTCAAGGAGGATCTTGGTCTGAAAGAGGTTGAAATGGAGATGAACGTGTATTGGCAAGATGAGAAAGCTCTACCAACAACATCTCTAAATGCATGTCATATATACGGTAGGGATAAAGACAAGGAGGCCATAATAAAGTTGTTGTTGGAGGATACTAGTGATGGTAAAGAAGTGGCTGTGATCCTTATTGTGGGCGTGGGTGGAATTGGAAAAACTACTTTGGCCCAATCAGTGTACAATGATGACAACTTGTACAATTGGTTTGATTGTAGAGCATGGGTTTATGGTTCTAAAGAATTTGATATTTTTAAGATCACAAAAACTGTGATGGAGAATATTACTGGAAAGCCTTGTGAAATAAATGATCTAAATTTACTTCGACTTGGTTTGATGGAAAAGCTGGCAGGTAAAAGATTCTTAATTGTTTTGGACGATGTCTGGACAGAGGATTATCTTAGTTGGAGTCTTCATACATATCAACATGGGGCTAGGGGAAGTAAAATTCTTGTAACAGCACGCAATGAGAATATAGCAACTATAATCGACACTGTTAAAGTTTATCATCTAGACGTATTGTCAGATGAAGATTGTTGGTTTGTGTTTGCGGAACATGCATGGCTTTCCATAGAATCCAATGAGCGCACAACAGCACTAGTAACAATTGGCAGGGAGATTGTAAAAAAGTGTAATGGATTGCCTTTGGCTGCGCAATCACTTGGACGTATATTGAGAAGCAAACATCACATAGAGGAATGGTATAATATATTATTTAGTGAACTCTGGGACATTCCTGATAGTTTGATTCCAGCATTGGGAATTAGTTATCATTATCTATCTCCACAGTTAAAGCGGTGCTTTGTTTATTGTTCATTGTATCCTATAGATTATGAATTTTGGAAAGAGGAATTAATCTTGTTGTGGATGGCTGAGGGCCTTTTAAATCCCCAAAGAAATGGAAAGACTTTAGAAGAAACTGGTGACGACTATTTTGATGATTTGGTTTCGAGATCATTTTTTCAACCTTCAACAAGTTGGCCTCAACACAAATGTTTTGTGATGCACCAATACATGCATAATCTGGCAACATTCCTTGGTGGAGAATTCTATTTCAGATCAGAAGAACTTCAGAAAGTAATCAATATTCGTGCCTACACTCGTCATTTGTCATTTACCAAATTTGATGATATAGTCTTGGACAAAGTAAAATTTTTGAGAACTTTCTTGCCAATCAATTTTAAAGATGCTCCATTTGACAATGAAAATGCGCCATGTATCATAATGTCAAAGCTCAAGTACCTGAGAGTTTTATCATTTTGTGGCTTCCAAAGTTTAAATGCTTTGCCTGGTGCAATAGGTAAATTGATCCATTTGCGTTATCTAAATCTCTCTTACACATGTGTAGAAACACTGCCAGAGTCAGTGTGTAGTTTGTACAATCTACAAACTTTGAAGTTGTCTAATTGCAGAAAGTTGACTATGTTGCCTAGTGGCATGCAAAATCTTGTAAACTTGCGTCATCTTAGTATTCATTGTACTTCTATAAAAGAGATGCCTAGAGGAATGGGAAAATTAAACAATTTACAGCATTTAGATTCCTTTATTGTAGGCCAGCATCAAGAGAATGGGATAAGAGAATTGGGAGGACTTTTAAATCTTCACGGTCCACTTTCTATTATCAACTTGGAAAATGTTACCAAAAGTGATGAAGCATTAAAGGCTAGGATAATGGATAAAAAGCACATTAACAGTTTATCCTTGGAATGGTCTAAACGTCACAACAATAGTCTTGACTTCCAAATTGAAGTAGATGTACTCTGCAAGTTACAACCTCACCAAGACCTGGTTTCCCTATCAATAAGTGGTTACAAAGGAACCAGATTTCCAGATTGGGTGGGAAATTTTTCCTACTACAATATGACACATCTAAGATTATGTAACTGTAACAACTGTCGCATGCTTCCTTCACTTGGGCAACTGCCATCTCTCAAGGACCTCTATATTTCATGTTTGAATTCGGTGAAGATTATTGGTGCAAGTTTATACAAAACAGAAGATTGTTCTTTTGTGAAACCTTTTTCCTCCCTTGAATCTCTAACCATTCATAACATGCCTTGTTGGGAGGCGTGGATTTCCTTTGATTTGGATGCTTTTCCTCTACTTAAGGACCTTGAAATAGATCGTTGCCCCAATCTAAGGGGAGGTTTGCCAAATCACCTTCCTGCTCTGGAATCGCTGACGATTAAAGATTGCAAGCTGCTTGTCTCTTCTCTTCCAAGGGCTCCCGCTCTCCGAAGATTAAAGATACGTGGAAGCAAGAAAGTAAGGCTGCATGAGTTTCCTATTTTGGTGGAATCTTTAGAGGTAGAAGGAAGCCCAATGGTGACGTCCATGATCGAGGCCATCTCTAATATTAAACCAAGTTGTCTACAATCTTTAACATTGTCAGATTGTTCATCAGCCATATCATTTTCAGGTGGTGGTTTACCTGCATCGCTGAAGAGTCTAAATATTTGGGGTCTTAAGAAGTTGGAATTCCCGACGCAACACAAACATGAATTGCTAGAATCACTTGAAATACATGACAGTTGTGATTCACTGATATCTCTTCCATTGATTATCTTTCCAAATCTCAAACGTTTGGTACTTGTGAAGTGTGAAAATATGGAATCTCTCTTGGTTTCTCTGTCAGAGTCATCTAACAATCTGAGTTCTTTTGAGATTCGTGACTGTCCCAACTTTGTTTCATTCCCAAGAGAAGGATTGCCTGCTCCCAATTTGATTCGTGTCACAGTTGACAATTGCGACAAGTTGAATTCATTGCCTGAGCAGATGAGTACTCTTCTCCCAAAGTTACAATATCTTCACATAAACGACTGCTCGGAAATTGAGTCGTTTCCTGAAGGGGGTATGCCACCTAACTTGAGATTAGTATGGATTGACAATTGTAAGAAACTACTGAGAGGCATTGCATGGCCATCCATGCGCATGCTTACCTCTCTCTACGTCCAGGGTCCATGTTATGGAATCAAGTCCTTCCCAAAGGAGGGTTTGCTGCCTCCCTCTCTTACATCTCTGCATCTATTTGACTTTTCGAGTCTGGAAACATTGGACTGCGAGGGGCTTATCCATCTCACATCCCTTCAAGAATTAGAAATTAATAGTTGTCAAAAGCTGGAGAACATGGCAGGAGAAAGGCTTCCTGCCTCTCTAATAAAATTAAGCATACATGAATGCCCTATACTGCAAGAACGATGCCACAAGAAGCACAAAGAAATTTGGCCTAAAATTTCCCATATTCATGGCATTGTTGTTGGCAGTAGGAGTTAG	3705	0.3884	MDVELVGGASLYAFLQIVLDKLASTEVVNLIRGEKKLLQKLKTTLIKVGAVLDDAEKKQIAHDRRVNNWLNDIKNAVYEVDDLLDELSTKAVTQKQVSNWFSHFLNNKKMASKLEDIVDRLEYLLELKEDLGLKEVEMEMNVYWQDEKALPTTSLNACHIYGRDKDKEAIIKLLLEDTSDGKEVAVILIVGVGGIGKTTLAQSVYNDDNLYNWFDCRAWVYGSKEFDIFKITKTVMENITGKPCEINDLNLLRLGLMEKLAGKRFLIVLDDVWTEDYLSWSLHTYQHGARGSKILVTARNENIATIIDTVKVYHLDVLSDEDCWFVFAEHAWLSIESNERTTALVTIGREIVKKCNGLPLAAQSLGRILRSKHHIEEWYNILFSELWDIPDSLIPALGISYHYLSPQLKRCFVYCSLYPIDYEFWKEELILLWMAEGLLNPQRNGKTLEETGDDYFDDLVSRSFFQPSTSWPQHKCFVMHQYMHNLATFLGGEFYFRSEELQKVINIRAYTRHLSFTKFDDIVLDKVKFLRTFLPINFKDAPFDNENAPCIIMSKLKYLRVLSFCGFQSLNALPGAIGKLIHLRYLNLSYTCVETLPESVCSLYNLQTLKLSNCRKLTMLPSGMQNLVNLRHLSIHCTSIKEMPRGMGKLNNLQHLDSFIVGQHQENGIRELGGLLNLHGPLSIINLENVTKSDEALKARIMDKKHINSLSLEWSKRHNNSLDFQIEVDVLCKLQPHQDLVSLSISGYKGTRFPDWVGNFSYYNMTHLRLCNCNNCRMLPSLGQLPSLKDLYISCLNSVKIIGASLYKTEDCSFVKPFSSLESLTIHNMPCWEAWISFDLDAFPLLKDLEIDRCPNLRGGLPNHLPALESLTIKDCKLLVSSLPRAPALRRLKIRGSKKVRLHEFPILVESLEVEGSPMVTSMIEAISNIKPSCLQSLTLSDCSSAISFSGGGLPASLKSLNIWGLKKLEFPTQHKHELLESLEIHDSCDSLISLPLIIFPNLKRLVLVKCENMESLLVSLSESSNNLSSFEIRDCPNFVSFPREGLPAPNLIRVTVDNCDKLNSLPEQMSTLLPKLQYLHINDCSEIESFPEGGMPPNLRLVWIDNCKKLLRGIAWPSMRMLTSLYVQGPCYGIKSFPKEGLLPPSLTSLHLFDFSSLETLDCEGLIHLTSLQELEINSCQKLENMAGERLPASLIKLSIHECPILQERCHKKHKEIWPKISHIHGIVVGSRS*	1235

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso3g0658	1234	Gene3D	-	317	399	IPR042197	-
	Gso3g0658	1234	Gene3D	-	15	124	-	-
	Gso3g0658	1234	PANTHER	DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED	43	1009	-	-
	Gso3g0658	1234	Gene3D	Ribonuclease Inhibitor	1093	1219	IPR032675	-
	Gso3g0658	1234	SUPERFAMILY	L domain-like	905	1223	-	-
	Gso3g0658	1234	PANTHER	DISEASE RESISTANCE PROTEIN RP	43	1009	IPR044974	GO:0006952
	Gso3g0658	1234	Gene3D	-	145	312	IPR027417	-
	Gso3g0658	1234	Gene3D	-	400	488	IPR036388	-
	Gso3g0658	1234	PRINTS	Disease resistance protein signature	186	201	-	-
	Gso3g0658	1234	PRINTS	Disease resistance protein signature	259	273	-	-
	Gso3g0658	1234	PRINTS	Disease resistance protein signature	355	369	-	-
	Gso3g0658	1234	PRINTS	Disease resistance protein signature	601	617	-	-
	Gso3g0658	1234	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	149	415	IPR027417	-
	Gso3g0658	1234	Pfam	Rx N-terminal domain	14	96	IPR041118	-
	Gso3g0658	1234	CDD	RX-CC_like	12	121	IPR038005	-
	Gso3g0658	1234	Gene3D	Ribonuclease Inhibitor	952	1092	IPR032675	-
	Gso3g0658	1234	Pfam	NB-ARC domain	164	381	IPR002182	GO:0043531
	Gso3g0658	1234	Gene3D	Ribonuclease Inhibitor	525	929	IPR032675	-
	Gso3g0658	1234	SUPERFAMILY	L domain-like	478	887	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso3g0658	Gso-Chr3	19998395	20005855	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso3g0658	183	413	WRKY Transcription Factor Family	AT5G45050	24.895	8.29e-11	64.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso3g0658	-		-	gmx:100499652	2205.64