Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0646 ATGGACGAGACGAATATGAAGAGGAGGGCATTGAACCGTGAATATGCAAGACAATCGCGGTTGAGAAAGCATAAGCGATTGGAGGATTTGACCAACGAAGTCAACATGTTGCAAAGTGCAAACAAGAAGTTGGTAGAGAGCATCAAGGCTAAGGAGGAAGCATATGCTGAGACGGAAGTTGATAACAACATCTTGAGAGCGCAAACCGTGGAATTGACTGATCGATTGCGCTTTTTGCACTCTATCATTCAGGTTGCGGAAAAGGCCAAAGGGTTATCTGTTAATGTAAAGATTCCAAATCTTAAGCCGTAG 312 0.4359 MDETNMKRRALNREYARQSRLRKHKRLEDLTNEVNMLQSANKKLVESIKAKEEAYAETEVDNNILRAQTVELTDRLRFLHSIIQVAEKAKGLSVNVKIPNLKP* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0646 103 Coils Coil 27 68 - -
Gso3g0646 103 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 2 49 IPR004827 GO:0003700|GO:0006355
Gso3g0646 103 PANTHER BZIP TRANSCRIPTION FACTOR 44 2 99 - -
Gso3g0646 103 SUPERFAMILY Leucine zipper domain 6 53 IPR046347 GO:0003700|GO:0006355
Gso3g0646 103 CDD bZIP_plant_GBF1 6 56 IPR045314 GO:0003700|GO:0006355
Gso3g0646 103 Pfam bZIP transcription factor 6 57 IPR004827 GO:0003700|GO:0006355
Gso3g0646 103 PANTHER BZIP TRANSCRIPTION FACTOR 53 2 99 - -
Gso3g0646 103 SMART brlzneu 3 64 IPR004827 GO:0003700|GO:0006355
Gso3g0646 103 Gene3D - 5 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0646 Gso-Chr3 19567586 19567897 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0646 2 99 bZIP Transcription Factor Family AT3G62420 46.465 1.47e-23 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso3g0646 bZIP_1 1.5e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0646 K25786 - gmx:100813053 199.519