Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0587 ATGTTTTGCAATTTTCACATTATTCTTCTAATTGCTCTTGCACTTTTGGTACAAATATCATCTCAGCTTGGCTCCAAGGTAGAAGTGCTTCCTGGCTTTGAAGGCCCTCTTCCTTTTGAACTGGAAACAGGGTACGTTGGATTAGGAGAAAAAGATGATGACATGCAAGTGTTTTACTACTTTGTTAAGTCAGAAAATGATCCTCAGAAAGACCCTCTTATGCTTTGGCTAACTGGTGGTCCTGGCTGCTCTTCATTTTCAGGTCTTGCCTTTCAAATAGGTCCACTTCGATTCAAGATTGAGGAGTATGATGGGAGTGTGCCAAATTTGATCTTGAGGCCACAGTCCTGGACAAAGGTTTGCAACATTATTTTTGTAGATTTGCCTTTTGGAACTGGCTTCTCGTATGCAAAAAATCTCACTGCTCAACGGAGTGACTGGAAATTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATTGATCACCCAGAATTTCTTTCAAATGAATTTTATATGGGAGCTGATTCTTATTCTGGCATACCTGCCCCTGCTATTGTTCAAGAGATTTCAAATGGAAATGAAAAAGGTCTCCAACCACGGATAAATCTCCAGGGATATCTGCTAGGGAACCCCATAACAACAAGAAATGAAGGAAATGATCAAATCCCATTTGCTCATGGAATGGGACTTATTTCTGATGAACTATATGCGTCACTTCAGAGAAATTGTAAAGGAGAGTATGAAAATAGAGATTCCAGAAATGTGTTGTGTTTAAGAGATCTCAAACACTATGATGAGTGCCTTTCAGGAATCAATACTTTCTATATTTTGGATCGCTATTGTAAATCTGATTCGCCTAAAAAACATGAAGCTCAGTGGAGGAGATCTCTGACTCAGAAGTTTGAGGCCTCTCTTAATTCTCATCTCAGAGTGCCAGACATAAGATGCCAAATTTTTGGGTTTTTCCTTGCCACTCAATGGGCCAATGACGAAAGTGTTCGCAAGTCACTGCATATTCGAGAGCTTAATGTACTTCAGGGAACTATAGGCAAATGGGAACGTTGTTACACTACAGATTTTGAGGAACAGATCTTCAGTAGCTTTGAGTTTCATGTAAATCTCAGTGGAAAAGGATATCGTTCTTTAATATACAGTGGAGATCATGATGCAGTTGTTCCTTTCATGTCAACCCAAGCATGGATTAGGGCTCTAAACTACTCCATTGTGGAAGATTGGAGGCCATGGCTTCTAGAAGACCAAGTTGCAGGATACACAAGGACTTACTCGAATCAAATGACATTTGCAACTGTGAAGGGTTCAGGACATACAGCTCCAGAGTACAAGCCTGAGGAAGGTTTTGCCATGTTCAGTAGATGGATAGCTAATATGCCTTTGTAA 1404 0.4024 MFCNFHIILLIALALLVQISSQLGSKVEVLPGFEGPLPFELETGYVGLGEKDDDMQVFYYFVKSENDPQKDPLMLWLTGGPGCSSFSGLAFQIGPLRFKIEEYDGSVPNLILRPQSWTKVCNIIFVDLPFGTGFSYAKNLTAQRSDWKLVHHTHQFLRKWLIDHPEFLSNEFYMGADSYSGIPAPAIVQEISNGNEKGLQPRINLQGYLLGNPITTRNEGNDQIPFAHGMGLISDELYASLQRNCKGEYENRDSRNVLCLRDLKHYDECLSGINTFYILDRYCKSDSPKKHEAQWRRSLTQKFEASLNSHLRVPDIRCQIFGFFLATQWANDESVRKSLHIRELNVLQGTIGKWERCYTTDFEEQIFSSFEFHVNLSGKGYRSLIYSGDHDAVVPFMSTQAWIRALNYSIVEDWRPWLLEDQVAGYTRTYSNQMTFATVKGSGHTAPEYKPEEGFAMFSRWIANMPL* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0587 467 Pfam Serine carboxypeptidase 31 464 IPR001563 GO:0004185|GO:0006508
Gso3g0587 467 SUPERFAMILY alpha/beta-Hydrolases 30 466 IPR029058 -
Gso3g0587 467 Gene3D alpha/beta hydrolase 30 466 IPR029058 -
Gso3g0587 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 466 IPR001563 GO:0004185|GO:0006508
Gso3g0587 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Gso3g0587 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Gso3g0587 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Gso3g0587 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Gso3g0587 467 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 7 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0587 Gso-Chr3 16344270 16350601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0587 21 50 Calmodulin-binding Proteins AT2G22960 66.667 2.69e-07 48.9