Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0564 ATGGCAATTAACATTTTGAACCCTCAAAAGGCTCAAGCAAGCCCTTCTAATCTTTCAATTTTCGAAGTTCTTGATTTTCCACATCTTCTCATGGCCACCAACCTCAACATGCTCCTCAAGTTCCTGTCTTTGTTGGTGTTCCTTCTGATCCCAGTTTCATCTCAGCAAAACCAGCTTTTCTATGCTGGATTCAAGGGTTTGAAAAGCAACAACATGACCCTTGATGGGGTAGCAGAAATAGAGCCAAATGGGGTACTGAAACTCACAAATGATTCAAGTAAAGTGATGGGTCATGCTTTTTATCCAACCCCTTTTAGGTTCAAGAACTCTAGTGGTGGTGGTAATAAAGCTTTCTCCTTTTCTTCCTCTTTTGCTTTGGCTATTGTTCCAGAGTTTCCAAAGCTAGGAGGGCATGGCCTTGCCTTTGCAATTGCACCTACTAAGGAACTGAAGGCTCATCCAAGCCAGTATCTTGGTCTTCTTGACTCAACTGGCATAGGGAACTTCTCCAACCACCTCTTTGCTGTTGAGTTTGACACAGCCAAAGATTTTGAGTTTGGAGATATTGATGACAACCATGTTGGAATTGACATCAATAGTTTGTCCTCCATTGCTTCTGCATCTGCAGGTTACTACTCTGGAGATGAGGATTCAACCAAACAGAATGTCACCCTCCAAAGTGGGGTACCTATTCTAGCTTGGGTTGATTATGATGCTGCTCAAAGTGTGGTCCATGTCACAATTTCTGCATCTTCTACCAAACCAAAAAGGCCACTCTTGTCCTATCATGTGGATCTTTCACCAATCTTTGAGGATTTAATGTATGTTGGGTTCTCTGCATCAACAGGGATGCTTGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAGATCAATGGGCCAGCTCTACCCCTTGATCTCTCTTCTCTCCCACAGCTTCCAGGGCCAAAGAAGAAACACACGTCTCTGATAATTGGGGTTTCAGCCTCTGTTGTTTTTCTTGTATTGTGTGCTGTCTTATTAGGCATCTACATGTACAGAAGGTACAAGAATGCTGATGTTATAGAAGCTTGGGAGCTTGAGATTGGGCCACATAGGTACTCCTACCAAGAACTCAAGAAAGCAACAAAAGGGTTCAAGGATAAAGGGCTGCTTGGACAAGGTGGGTTTGGTAGTGTTTACAAAGGAACATTGCCAAATTCCAATACCCAAGTTGCTGTTAAGAGAATTTCACATGACTCCAATCAAGGCCTTAGGGAATTTGTGTCAGAAATAGCCAGCATAGGCCGGCTTCGCCACCGGAATTTGGTTCAGCTGCTGGGGTGGTGTCGCCGCCGTGGTGACCTCCTCCTTGTGTATGACTTCATGGAAAATGGGAGTTTAGACAAGTACTTGTTTGATGAGCCAGAAATAGTCTTAAGTTGGGAGCAAAGGTTTAAGGTCATCAAGGATGTTGCTTCAGCCCTTTTGTATCTTCATGAGGGCTATGAGCAGGTGGTGATACATAGAGATGTGAAGGCTAGCAATGTGCTTCTAGATGGTGAACTCAATGGAAGATTAGGAGATTTTGGATTAGCAAGGTTGTATGAACATGGGACTAACCCAAGTACCACAAGGGTGGTTGGAACCTTGGGCTATTTGGCACCCGAGGTGCCTAGGACAGGGAAGGCAACTCCTAGCTCCGATGTTTTTGCATTTGGTGCACTTTTACTAGAGGTGGCATGTGGACTCAGACCACTTGAGCCAAAGGCAATGCCGGAAGATATGGTTTTGGTTGATTGTGTTTGGAACAAATTCAAACAAGGGAGCATACTCGATTTGGTGGACCCTAAACTAAATGGTGTTTTTAATGAAAGAGAGATGCTCATGGTGTTGAAATTAGGGCTTCTGTGTTCAAACAGTTCACCCACTGCTAGGCCTAGCATGAGACAGGTGGTGAGATTTTTAGAAGGAGAAGTTGGCGTGCCAGATGAGTTGAAAAAGCCGGGAGAGGGAGGTTACCAGGAGGGTTTTGATGAATTCTTGCACTCACTTGAATCTTCTTCATTTGATCAGATGAGCACAGGTTCATATGGTAGAACTAGAGACATGGATTCTAGTTTTCCTTCTTTAACTGATACATCTCTTTTTAGTCCCCATGGTAAAGGACAAACAATGTGA 2160 0.4394 MAINILNPQKAQASPSNLSIFEVLDFPHLLMATNLNMLLKFLSLLVFLLIPVSSQQNQLFYAGFKGLKSNNMTLDGVAEIEPNGVLKLTNDSSKVMGHAFYPTPFRFKNSSGGGNKAFSFSSSFALAIVPEFPKLGGHGLAFAIAPTKELKAHPSQYLGLLDSTGIGNFSNHLFAVEFDTAKDFEFGDIDDNHVGIDINSLSSIASASAGYYSGDEDSTKQNVTLQSGVPILAWVDYDAAQSVVHVTISASSTKPKRPLLSYHVDLSPIFEDLMYVGFSASTGMLASSHYILGWSFKINGPALPLDLSSLPQLPGPKKKHTSLIIGVSASVVFLVLCAVLLGIYMYRRYKNADVIEAWELEIGPHRYSYQELKKATKGFKDKGLLGQGGFGSVYKGTLPNSNTQVAVKRISHDSNQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMENGSLDKYLFDEPEIVLSWEQRFKVIKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGTNPSTTRVVGTLGYLAPEVPRTGKATPSSDVFAFGALLLEVACGLRPLEPKAMPEDMVLVDCVWNKFKQGSILDLVDPKLNGVFNEREMLMVLKLGLLCSNSSPTARPSMRQVVRFLEGEVGVPDELKKPGEGGYQEGFDEFLHSLESSSFDQMSTGSYGRTRDMDSSFPSLTDTSLFSPHGKGQTM* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0564 719 CDD lectin_legume_LecRK_Arcelin_ConA 61 300 IPR001220 GO:0030246
Gso3g0564 719 ProSitePatterns Protein kinases ATP-binding region signature. 385 408 IPR017441 GO:0005524
Gso3g0564 719 CDD STKc_IRAK 385 651 - -
Gso3g0564 719 ProSiteProfiles Protein kinase domain profile. 379 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0564 719 Gene3D - 58 299 - -
Gso3g0564 719 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 38 703 - -
Gso3g0564 719 Pfam Legume lectin domain 58 309 IPR001220 GO:0030246
Gso3g0564 719 Gene3D Phosphorylase Kinase; domain 1 364 455 - -
Gso3g0564 719 SMART serkin_6 379 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0564 719 Pfam Protein kinase domain 380 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0564 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Gso3g0564 719 SUPERFAMILY Protein kinase-like (PK-like) 361 656 IPR011009 -
Gso3g0564 719 MobiDBLite consensus disorder prediction 686 719 - -
Gso3g0564 719 SUPERFAMILY Concanavalin A-like lectins/glucanases 60 302 IPR013320 -
Gso3g0564 719 Gene3D Transferase(Phosphotransferase) domain 1 456 661 - -
Gso3g0564 719 PANTHER - 38 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0564 Gso-Chr3 14672563 14675307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0564 52 718 Receptor kinase-like Gene Family AT3G55550 58.798 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso3g0564 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0564 - - gmx:100807337 1357.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0564 3 14672563 14675307 Gso18g0320 18 2944511 2950069 ECH
Gso3g0564 3 14672563 14675307 Gso3g0564 3 14672563 14675307 ECH