Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0557 ATGAGAGCTATAAGTCACCACCTTCTAGTTTCACTACTCGATTGGAGAATCTCTACCTCACGATCTCTTTTTTCTCTTAGAACCATCATGTCACAATCTGATCATTCCTCTGCTTTTACCACACCCAGATTAGTTCTCAAGAAGGTTTTGGCCAAATCTCAACATGAAGGGGATGGAGCTGTTGTTAGAAGAGGGATTGGAAGGAGCGAGTTGAAGAACTTGGATCCCTTCCTAATGTTGGATCACTTCTCAGTATCTCCCCCAGCAGGATTTCCGGATCATCCACACCGAGGTTTTGAAATCGTCACCTACATGCTAGAGCTAGCTGGCATTCTTTTGGATACTGCGAATCTAAGGGACCCTCGTTGCTCCTCTAAAGATAAGTACATGGCTTCATTATTGATCAATGGTGCTCCTATAATCACAAGTGCAGATTCAAGGTCAGTGCAAATTGGCATGAGTTGTATCGGAATTTCAATCGGACAGCTTCTTTCTCACGCAGGAAATCTAGCTCAAGAAATAACACGCTTCCAGTTATCTGAGAAACTTCGAGCACTTATTGTCGTTTCGGGGTATTATAACGATGAAAAGAACTTCAAGAGAGAAGTTTTAATATCTATGGAATCTGCAAAGCAATTGGAGAGTTTGCTCTTCTTCTTCGATTTCAATGCTTCCCGGCTGCCACTCAAGAGCTTACACTTTCCAGAAGTGGCCATGGAAGCTGCAATAGCAGGTGGCATTTCAGTTTTGGAGATTGTGGTGTCGACCTCAGGTGTGTTTGAGGTTGTTTACCTAAATTTTTCTACTTCCTTACTAGTCTTGTTCTTAGATTTAGAATTCATATGCTTGAGATTGTGGTGTCGACCTCAGGTGTGTGGAATTTCATTATTTGTATTGTATTACATATAA 909 0.4158 MRAISHHLLVSLLDWRISTSRSLFSLRTIMSQSDHSSAFTTPRLVLKKVLAKSQHEGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPAGFPDHPHRGFEIVTYMLELAGILLDTANLRDPRCSSKDKYMASLLINGAPIITSADSRSVQIGMSCIGISIGQLLSHAGNLAQEITRFQLSEKLRALIVVSGYYNDEKNFKREVLISMESAKQLESLLFFFDFNASRLPLKSLHFPEVAMEAAIAGGISVLEIVVSTSGVFEVVYLNFSTSLLVLFLDLEFICLRLWCRPQVCGISLFVLYYI* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0557 302 Gene3D Jelly Rolls 52 119 IPR014710 -
Gso3g0557 302 PANTHER PIRIN-LIKE PROTEIN 35 114 - -
Gso3g0557 302 Gene3D DHHA2 domain 133 252 IPR038222 -
Gso3g0557 302 Pfam Pirin 63 107 IPR003829 -
Gso3g0557 302 PANTHER PIRIN-RELATED 35 114 IPR012093 -
Gso3g0557 302 SUPERFAMILY RmlC-like cupins 43 107 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0557 Gso-Chr3 14423543 14428931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0557 40 122 Calmodulin-binding Proteins AT3G59220 57.831 9.91e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0557 K06911 - gmx:102668539 566.614