Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0554 ATGGCTTGTTCCCGCATTCACTTCAACCTTAATCTCCGTTTCCCCTCTGATGCGGCACCAATTGCTTCCACATGTCACTCTCCCTCTCGCCTCTCTCTTTCCCTCTCGCACTCCCCTCTCTTCACAACAACACCAAAGGCAGATAATACCACTAATTCTAAAAACAGTGAATTGGATATTTTTAATTTCCCATTTATTTCATGCTTCATTTATTATTTTAATTATTTTTTTAATATTGGGTTTGTTTGCTTTTCTTTGCTTTGCTCCCATTTATTACGTTGGATTCGATTCTCACGCATGTTTATTTATATACCCTCTTTTTATTCGTTGTGTTGTGTTCTGTTGCTTTCTTTCTCCGCTCAGATCGCTTATTCCAGTGCTCCGCGGCGCACGTGTGGTGCGGTGTGCTCTCAGATGACCATGGAGGAGAAGCCTCTCTCTGAGAACCGAATGCTCGTGTATGTGCCTCCTCATCCGTTGATCAAGCATTGGGTTTCAGTTTTGAGGAATGAGCAAACTCCATGTCCCATCTTCAGAAATGCAATGGCTGAGCTGGGAAGGCTACTAATGTATGAAGCTTCAAGGGATTGGTTGCCCACCGTTTCTGGAGAGATTCAATCACCAATGGGTGTAGCCTCAGTGGAATTCATTGATCCAAGGGAGCCTGTGGCTGTAATTCCAATCCTAAGAGCAGGCCTTGCTCTTGCTGAACATGCATCATCGATCTTGCCTGCAACAAAAACATATCATTTAGGAATAAGCAGAGATGGGGAAACTCTTCAGCCCACTATATATTTAAACAAGTTACCCGGGAAATTTCCAGAAGGATCTAAAGTTTTTGTGGTTGATCCTATGCTGGCAACAGGTGGCACTATAGTGGCAGCTGTGAGCCTCTTAAAGGAACGTGGAGTTGGCAACAAGCAGATTAAAGTGATATCTGCTGTTTCTGCCCCTCCTGCTCTTCAAAAGCTGAGCGAGCAGTTCCCTGGGCTTCATGTGTATACTGGAATAATTGACCCCGAAGTTAATGAAAAAGGGTTCATAATTCCTGGCCTTGGAGATGCTGGGGACCGTAGCTTTGGTACAGATACATGA 1095 0.442 MACSRIHFNLNLRFPSDAAPIASTCHSPSRLSLSLSHSPLFTTTPKADNTTNSKNSELDIFNFPFISCFIYYFNYFFNIGFVCFSLLCSHLLRWIRFSRMFIYIPSFYSLCCVLLLSFSAQIAYSSAPRRTCGAVCSQMTMEEKPLSENRMLVYVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVSGEIQSPMGVASVEFIDPREPVAVIPILRAGLALAEHASSILPATKTYHLGISRDGETLQPTIYLNKLPGKFPEGSKVFVVDPMLATGGTIVAAVSLLKERGVGNKQIKVISAVSAPPALQKLSEQFPGLHVYTGIIDPEVNEKGFIIPGLGDAGDRSFGTDT* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0554 364 Pfam Uracil phosphoribosyltransferase 155 362 - -
Gso3g0554 364 SUPERFAMILY PRTase-like 153 361 IPR029057 -
Gso3g0554 364 TIGRFAM upp: uracil phosphoribosyltransferase 153 362 IPR005765 GO:0004845|GO:0006223
Gso3g0554 364 Gene3D - 140 362 IPR029057 -
Gso3g0554 364 PANTHER URACIL PHOSPHORIBOSYLTRANSFERASE 2 104 359 - -
Gso3g0554 364 PANTHER URIDINE KINASE 104 359 - -
Gso3g0554 364 CDD PRTases_typeI 218 338 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0554 Gso-Chr3 14293914 14305092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0554 106 364 PRT Gene Family AT3G53900 71.429 2.75e-134 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0554 K00761 - gmx:100797953 488.804