Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0547 ATGGCGCAGGCGGCGGGGCGGAGCAGGGTGGTGGGAGACTACGTGGTGGGGAAGCAAATCGGCGCGGGGTCGTTCTCGGTTGTGTGGCACGGGAGGCACAAGGTGCACGGGACCGAGGTGGCGATCAAGGAGATCGCCACGCTTCGCCTCAATAAGAAGTTGCAGGAGAGCCTCATGTCCGAGATTTTCATCTTGAAGCGGATTAACCACCCTAACATAATCTCTTTGCACGATATCATAAATCAGGTTCATGGGAAGATACATCTTGTGTTAGAGTACTGTAAAGGGGGAGATCTTTCCTTGTACATCCAACGCCACGGAAAGGTACCAGAGGCAACTGCCAAACATTTTATGCTGCAGCTGGCTGCTGGTCTACAAGTTCTTCGGGACAATAACCTTATTCATCGAGACCTGAAACCACAGAACCTTCTTCTCTCTCGAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGATCTCTGCAACCTAGGGGCCTTGCTGAAACCTTGTGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAACTACAGAAATATGATGCTAAGGCAGATCTTTGGAGTGTTGGTGCAATCCTATTTCAGCTTGTTACAGGAAGAACGCCTTTCACTGGAAACAATCAAATACAGTTACTACAAAATATTATGAAATCAACAGAATTGCAGTTTCCGTCTGATAGCCAAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAATTGCTACGTCGGAATCCAGTGGAACGTCTAACTTTTGAAGAATTCTTTAACCATCCATTCCTTTCTCAGAAGCAAACAGAACAGGATGAGCCATTGAGGAATAGAAGTTCTCCAAGGCTGGTTGGTGGGTTTTGTTCTACAGGGTCTGACCCTTTGAGAAGAACTGAGGAAAATTATCAAGAAGATTGTTTGCCTTTCATGTTAGATGATGACTCTAGTGGCCCGGAGGGGAGTCCATCCTTTTCAAGGAAGAAGTCCTCAATGAAGTCGACCTATGGATTTGATCTAAATGCTAAACTAGATAAAGCGGAGTCATCATCTCCTATTTCTAATAACATAAATCATACTTCTGGATTTGGTAGTGTGACACAGAGATCTGAAAACACTACTAAAAGATTGGACAACCATAAAATTTCTAGAAATCTCACTAATCCTCTAGAATCTCCAGAACAGCTATTCACAAGTCCTTATCCAAAAGCAGCAGTTACGGATTCCCTGGAGAATATTGATCAAGAATATGTTCTGGTGTCTGGGCCCCCTATAGATGTTTCATCTTCTTCAGTGGGTGCTTCAAGGCCCAGCCATACCCCATATCGGTCAGGTAGTTTACCCCAAGAGTCTTCTAGTACAATCACTAGACTAAGTGTTCCAATGCCAATAGTTGGTGTACCTTCCAATAGCATATGCCAAATTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACATCGCTTGGATCAATGGATACTGGTGATGAACAGCCATCAGCTCACTGCATGACAAGGGTGAAATCATTGCAACAGTGTGCATCTTCCATCACGGAGTTAGTTAATGAAAAGATGGAGGCAGGAAAGCATCTGGAAGCATTTTCTATTCAGCTTGTAATTCTTGCAATCTGGAAGCAAGCACTGCATATATGCCATACACAAGCTGCATCAGCCATGGAAGGAAGTCCAAATCAAGAAACTTCAAGATATAGAAGGAGCACCAGCAGGAAGCATGGCAGTCCTGATTCAGAAGAATGCCTTGATGGAAACACCCTAGGGCCGAAGGATATATTATCTCAAATTGAAAGTGAATTTTTGAGGGAATTTGAGCATGCTGAAGAACTTGCCAAGACCATTGAGCCCGGAAACACAGAGATGCCAGATGCAATGGAGACAATATTTCAATCCGCCCTTGCTTTTGGAAGACATGGGGGTGTAGAAGAGCTCATGGGAGAAATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTCCGTCTGTTAGTTTTCCTTTTAGTTGAGGGACCATCCCTGATTCTTAATCCTCCATTTTCACTGACAAACTCAGACCGTTACAGGCTTCGGAATTACATTGATATTCTTAATAACAGGCAAGGTTATTCAAGGTCCCAGCGAATGACACTACTGAAATGTGATGACAGTCGAGGTATCCTTAAGGAAAAGTTTTAG 2208 0.4402 MAQAAGRSRVVGDYVVGKQIGAGSFSVVWHGRHKVHGTEVAIKEIATLRLNKKLQESLMSEIFILKRINHPNIISLHDIINQVHGKIHLVLEYCKGGDLSLYIQRHGKVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELQFPSDSQSLSFECKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQTEQDEPLRNRSSPRLVGGFCSTGSDPLRRTEENYQEDCLPFMLDDDSSGPEGSPSFSRKKSSMKSTYGFDLNAKLDKAESSSPISNNINHTSGFGSVTQRSENTTKRLDNHKISRNLTNPLESPEQLFTSPYPKAAVTDSLENIDQEYVLVSGPPIDVSSSSVGASRPSHTPYRSGSLPQESSSTITRLSVPMPIVGVPSNSICQIGSSGSQDSAPGTSLGSMDTGDEQPSAHCMTRVKSLQQCASSITELVNEKMEAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPNQETSRYRRSTSRKHGSPDSEECLDGNTLGPKDILSQIESEFLREFEHAEELAKTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGEMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKCDDSRGILKEKF* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0547 735 MobiDBLite consensus disorder prediction 577 591 - -
Gso3g0547 735 MobiDBLite consensus disorder prediction 354 379 - -
Gso3g0547 735 MobiDBLite consensus disorder prediction 274 304 - -
Gso3g0547 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Gso3g0547 735 MobiDBLite consensus disorder prediction 354 404 - -
Gso3g0547 735 MobiDBLite consensus disorder prediction 482 502 - -
Gso3g0547 735 ProSiteProfiles Protein kinase domain profile. 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0547 735 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 709 IPR045269 GO:0004674|GO:0006914
Gso3g0547 735 MobiDBLite consensus disorder prediction 482 507 - -
Gso3g0547 735 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1B 1 709 - -
Gso3g0547 735 SMART serkin_6 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0547 735 MobiDBLite consensus disorder prediction 563 600 - -
Gso3g0547 735 SUPERFAMILY Protein kinase-like (PK-like) 10 469 IPR011009 -
Gso3g0547 735 MobiDBLite consensus disorder prediction 435 458 - -
Gso3g0547 735 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Gso3g0547 735 Pfam Protein kinase domain 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0547 735 MobiDBLite consensus disorder prediction 316 338 - -
Gso3g0547 735 CDD STKc_ATG1_ULK_like 20 271 - -
Gso3g0547 735 Gene3D Transferase(Phosphotransferase) domain 1 5 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0547 Gso-Chr3 13237200 13250792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0547 10 279 CBL-interacting serine-threonine protein kinases AT2G30360 36.232 6.35e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gso3g0547 Pkinase 4.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0547 K08269 - gmx:100791596 1439.86