Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0536 ATGGGTGCTTGTTGGAGCAGTAGGATTAAGTCTGTTAGTCCTTCCAATACAGGGTTCACTTCTAGAAGCGTCAGCAGAGATGGCTACGATATCCACTCGAATAGCAGGAACTCATCAGCCTCCATCCCCATGACCCCTCGGAGTGAGGGCGAGATCTTACAATCTTCGAATTTGAAAAGCTACAGCTACAATGAGCTAAAAATGGCCACAAAAAATTTCTGCCCAGACAGTGTCTTAGGAGAGGGTGGATTTGGTTCAGTTTTCAAGGGCTGGATTGATGAACATTCGCTCGCTGTTACCAGAGCCGGAACAGGCATGGTTGTTGCTGTGAAGAAACTTAATCAAGAGAGTTTCCAGGGTCACAAGGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTGCAGCATCCTAATCTTGTCAAGTTGATAGGCTACTGCTTAGAGGATCAGCACCGGCTTCTAGTTTATGAGTATATGCCCAAAGGAAGTGTGGAGAATCATCTGTTCAGAAGAGGATCTCATTTTCAGCAGCTTTCTTGGACTTTGAGATTGAAAATATCCCTTGGGGCTGCAAGGGGTCTTGCTTTTCTCCATAGCACAGAAACTAAAGTCATATACCGCGACTTTAAGACTTCCAATATCCTGCTTGATACTAACTATAATGCAAAACTTTCTGATTTTGGGCTGGCCAGAGATGGACCAACTGGTGATAAGAGCCATGTTTCTACTAGGGTCATGGGAACCCATGGATATGCAGCACCAGAGTATCTAGCAACAGGTCACCTCACTGCCAAGAGTGATGTCTATAGTTTTGGAGTAGTTCTTTTGGAAATGTTGTCTGGAAGACGCGCCATAGACAAGAACCGGCCATCCGGAGAGCAATGCCTTGTTGAATGGGCAAAGCCTTACCTTTCTAACAAACGCAGAGTTTTTCGCGTGATGGATAGTCGTCTTGAAGGCCAGTATTCCCTTACACAAGCTCAAAGGGCAGCCACCCTTGCTTTTCAATGTCTTGCTGTAGAGCCCAAATACAGGCCAAATATGGATGAGGTGGTGAGAGCATTGGAGCAGCTACGCGAATCAAATAATGATCAGGTGAAAAATGGTGATCATAAAAAGCGTAGTAGAGTTAGTGGATCTGGCCTTGGTCACCACAATGGACTCCCTGCATCTACTAGCAAAGGAAGTATAGATGCTGCTAAATTTAATTATCCTAGGCCCTCTGCTTCTCTCCTTTATTAA 1242 0.4501 MGACWSSRIKSVSPSNTGFTSRSVSRDGYDIHSNSRNSSASIPMTPRSEGEILQSSNLKSYSYNELKMATKNFCPDSVLGEGGFGSVFKGWIDEHSLAVTRAGTGMVVAVKKLNQESFQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDQHRLLVYEYMPKGSVENHLFRRGSHFQQLSWTLRLKISLGAARGLAFLHSTETKVIYRDFKTSNILLDTNYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPSGEQCLVEWAKPYLSNKRRVFRVMDSRLEGQYSLTQAQRAATLAFQCLAVEPKYRPNMDEVVRALEQLRESNNDQVKNGDHKKRSRVSGSGLGHHNGLPASTSKGSIDAAKFNYPRPSASLLY* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0536 413 SUPERFAMILY Protein kinase-like (PK-like) 39 355 IPR011009 -
Gso3g0536 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 112 IPR017441 GO:0005524
Gso3g0536 413 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0536 413 Coils Coil 348 368 - -
Gso3g0536 413 Pfam Protein kinase domain 77 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0536 413 Gene3D Transferase(Phosphotransferase) domain 1 159 381 - -
Gso3g0536 413 MobiDBLite consensus disorder prediction 363 377 - -
Gso3g0536 413 MobiDBLite consensus disorder prediction 8 49 - -
Gso3g0536 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Gso3g0536 413 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Gso3g0536 413 MobiDBLite consensus disorder prediction 360 399 - -
Gso3g0536 413 PANTHER OS01G0588500 PROTEIN-RELATED 22 394 - -
Gso3g0536 413 PANTHER KINASE 1B 22 394 - -
Gso3g0536 413 CDD STKc_IRAK 79 358 - -
Gso3g0536 413 MobiDBLite consensus disorder prediction 1 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0536 Gso-Chr3 12001538 12004570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0536 36 355 Glycoside Hydrolase AT3G07070 47.432 2.46e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso3g0536 Pkinase 4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0536 - - gmx:100818744 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0536 3 12001538 12004570 Gso3g0536 3 12001538 12004570 ECH