Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0518 ATGGTTTATGATTCTCTGTGTGGTTATGCTCATCACTTGACTCTGCTTCTATTTCACCATTCTTTGCACCTTTATCACCCTTCAGCTCTGAACACCTTTGAACAAATAGTATATAGTGCCAAAGGAAAGCAAATTGTAGTTTTTCTTGACTACGATGGAACTCTCTCTCCAATTGTTGCAGATCCAGATAAGGCTTTCATGACTAGAAAGATGAGAGCAACACTAAAGGGTATATCAAGACATTTTCCCATAGCAATCGTGACTGGAAGGTGCAGAGACAAGGTATATAACTTTGTAAAATTGGCAGAACTTGGCATGGACATCACTGGTCCAACAAAAAGTCCAAAAGGTAATAATAATAATAAAGCAGTGTTGTTCCAATCCACGAGTCAATTCCTGCCAATGATCGATGAGGTGTACAAGATCTTGTTAGAAAAAACGAAGACTATCCCAAGGGCTAAGGTTGAGAACAATAAGTTTTTTTTGTCCTTGCACTTTCGTTGTGTTGACAAAAAGAGTTGGGCAGCGTTGGCGGAGAAAGTTAGATTGGTGCTCAATGAGTATCCACAACTCAGACTAACCCAAGGGAGAAAAGTGCTAGAGATCCGTCCAACCATCAAATGGGACAAGGGCAAGGCTCTTGAATTTTTGTTAGAATCATTAGGGTACAAGAATTTGAATGATGTATTTCCAATCTATATTGGTGATGATCGAACTGATGAGGATGCTTTTAAAGTTTTGCGCAGTAGGGGTCAAGGAATTGGGATTCTTGTTTCTAGAGTTGCAAAAGAAACAAATGCTTCCTATTCCTTGCAATGCAGGTTGCAAGTTGGAGGAGTGCAACTTTTGATACTGGACCTCCTGTAA 867 0.3979 MVYDSLCGYAHHLTLLLFHHSLHLYHPSALNTFEQIVYSAKGKQIVVFLDYDGTLSPIVADPDKAFMTRKMRATLKGISRHFPIAIVTGRCRDKVYNFVKLAELGMDITGPTKSPKGNNNNKAVLFQSTSQFLPMIDEVYKILLEKTKTIPRAKVENNKFFLSLHFRCVDKKSWAALAEKVRLVLNEYPQLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYKNLNDVFPIYIGDDRTDEDAFKVLRSRGQGIGILVSRVAKETNASYSLQCRLQVGGVQLLILDLL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0518 288 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 21 277 IPR044651 GO:0004805|GO:0005992
Gso3g0518 288 SUPERFAMILY HAD-like 46 271 IPR036412 -
Gso3g0518 288 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE C-RELATED 21 277 - -
Gso3g0518 288 TIGRFAM T6PP: trehalose-phosphatase 43 276 IPR003337 GO:0003824|GO:0005992
Gso3g0518 288 Gene3D - 47 271 IPR023214 -
Gso3g0518 288 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 47 249 IPR006379 -
Gso3g0518 288 Gene3D - 129 205 - -
Gso3g0518 288 Pfam Trehalose-phosphatase 48 273 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0518 Gso-Chr3 10347749 10349846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0518 41 258 Trehalose Biosynthesis Gene Families AT1G70290 25.328 2.86e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0518 K01087 - gmx:100802748 531.946