Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0488 ATGATAGGTCCAGTTGTTGTTACTAATGGGAACTTGAATCGAAACGATACCAGGGGAAAGACCATTACTTGCAAAGCTGCCGTGGCATATGGTCCTGGAGAGCCCTTTGTGGTGGAACGTGTTCTTGTTCATCCTCCTCAGAAAATGGAGGTTCGAATCAAGATCCTCTTCACCACAATCTGCCACACCGATCTCAGTTCTTGGCAAGGCAAGAACGAGGCTCAACGTGCTTATCCTCGAATTTTCGGCCATGAAGCTTGCGGGATTGCGGAGAGTGTGGGAGAAGGTGTAAATGACATGAAAGAAGGGGACTTGGTGGTGCCAATTTTCAATGGGGAATGTGGGGATTGCAAATATTGCAAGTGCGAGAAGACCAACATGTGTGAGAGATTTGGGGTGGATCCTATGAAGAAGGTGATGGCTAGTGATGGTGCCACAAGGTTTTCTACAACAGATGGAAAACCCATCTTCCATTTCTTGAACACTTCAACTTTCACAGAGTACACGGTGGTGGATTCAGCATGCGTTGTCAAGATTGACGTTGATGGCCATGGTGACCTCAATCCCTACATTAAAAAACTTACCTTAGTTGTGGCGTATCAACGGGTGTTGGGGCTGCTTGGAATATCGCTGATGAGCATTTTGGTTCAACTGTAG 657 0.4658 MIGPVVVTNGNLNRNDTRGKTITCKAAVAYGPGEPFVVERVLVHPPQKMEVRIKILFTTICHTDLSSWQGKNEAQRAYPRIFGHEACGIAESVGEGVNDMKEGDLVVPIFNGECGDCKYCKCEKTNMCERFGVDPMKKVMASDGATRFSTTDGKPIFHFLNTSTFTEYTVVDSACVVKIDVDGHGDLNPYIKKLTLVVAYQRVLGLLGISLMSILVQL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0488 218 Pfam Alcohol dehydrogenase GroES-like domain 50 178 IPR013154 -
Gso3g0488 218 PANTHER ALCOHOL DEHYDROGENASE 17 182 - -
Gso3g0488 218 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 83 97 IPR002328 GO:0008270|GO:0016491
Gso3g0488 218 Gene3D - 27 182 - -
Gso3g0488 218 SUPERFAMILY GroES-like 17 182 IPR011032 -
Gso3g0488 218 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 17 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0488 Gso-Chr3 9005575 9007354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0488 50 148 Monolignol Biosynthesis Gene Families AT4G39330 36.000 2.55e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0488 K00001 - gsj:114406139 444.121