Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0483 ATGACGATGACGATTTCGATGATCCCCACCTCTCCTTCGTCTCTGCCCTCGTCTCTTCAGTCACGAAAAAATAGAGCCCCTCCGCTGATCGACACCGCTCCAGATTCACCGCCTCTCGTTCGTTCTCATTTCGAGGGAGACATCGATTTCCTCTCTGTGAAGAGGCCAGTGCTAGATCAGAACTTGTACAACATGGGGATGAAAATGACCTCAACAACGTTTGCATCCACCACTGTTAATGTCCTCCCGGCCATTACTTTTGTAATGGCACTCGTTTTCAGGCTAGAGAAGGTGAACTTGAGAAAATTTCACAGTGTAGCCAAGGTCATTGGAACCGTCATAACAGTTTCAGGAGCTATGGTTATGACTCTGTACAAAGGCCCTGCCTTCCAAATCATAAAGGGTGGAGGAGCCATGAGCCACCATAGCAACTCTAGCAGTACCAGTACCACCGAACCCTCTGACCAGCACTGGATAGTTGGAACTGTTTATCTCCTATTTCTTCATTTTTTTCCAATCTAG 522 0.4732 MTMTISMIPTSPSSLPSSLQSRKNRAPPLIDTAPDSPPLVRSHFEGDIDFLSVKRPVLDQNLYNMGMKMTSTTFASTTVNVLPAITFVMALVFRLEKVNLRKFHSVAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAMSHHSNSSSTSTTEPSDQHWIVGTVYLLFLHFFPI* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0483 173 MobiDBLite consensus disorder prediction 1 32 - -
Gso3g0483 173 PANTHER WAT1-RELATED PROTEIN 51 171 IPR030184 GO:0016021|GO:0022857
Gso3g0483 173 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 124 - -
Gso3g0483 173 MobiDBLite consensus disorder prediction 1 25 - -
Gso3g0483 173 PANTHER WAT1-RELATED PROTEIN 51 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0483 Gso-Chr3 8868955 8882691 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0483 51 166 Nodulin-like Gene Family AT1G44800 56.034 7.86e-40 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0483 - - gsj:114404922 296.975