Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0476 ATGGGTTCTCGAAACCATGAGGTATCAATGTTGATGGAGAATGGTGGTGGTGGGAACATCGTGAAGGGGTTGAGCAAGGAAATGAGACATGGCAGAACGGCACATAACATGTCATCATCTTCTTTGCACAAGAAATCTGACCTAACTCTTGTGTCTAAGGTTCACTCTATCCCCCTCAGGAATGTGTTGGTGAATTTGCAAGAGGTTGTTCTTGGAACCAAGCTCTCTATTCTTTTCCCTGCCATTCCCCTTGCCGTTGTTGCTCAATGCTATGGCTTTGGAAGACCTTGGATTTTTGCATTGAGCTTACTTGGGCTTACCCCACTTGCTGAACGAGTCAGTTTCTTGACAGAACAACTCGCTTATTACACTGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTTAGCAATAACAAAATTCACGTGGTCAAGTATTCTCTACTGGGTTCCATCATTTCTAATCTTCTTCTGGTTCTCGGAACCTCTCTATTCTGTGGTGGCATTGCAAACATTAGAAAGGAGCAAAAATATGATAGAAGACAGGCAGATATAAACTTGCTCATGTTGTTTGTGGCACTGCTTTGCCACTTGCTGCCAGTGTTGTTCCATTATGTTGGTGCCTCAGCTGCTGACACTGCAGAGTCATCTCTGCAGTTGTCAAGAGCTGCTAGCATTGTTATGGTGATTGCTTATTGCGCTTACCTCGTCTTCCAATTATGGACTCACCGGCAGCTATTTGAAGCCCAGGATGAAGTTGATGAAGAAGGTGGCAATGAATCAGAAGAAGCAGTGATAGGATTCTGGAGTGCATTTGCTTGGCTGGTTGGGATGACTGTGATCATTGCTCTACTGTCTGAATATGTCGTGCAAACAATTGAGGATGCATCCGATTCATGGGGTTTGTCTGTTAGCTTCCTCAGCATAATCTTGCTACCAATAGTTGGCAATGCAGCTGAACATGCAGGAGCGATAATATTTGCCTTCAAGAACAAACTGGACATCTCGTTGGGTGTTTCCTTGGGTTCGGCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATAATGGGAATCAAAATGGACCTCAACTTCAACATCCTAGAGACAGGTTCTTTTGCTGTGGCAATAACAATCACAGCCTTCACGTTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCCTACTCTGCTACATTGTTATTGGGGCATGCTTTTTTGTACAAAGAACACCCTCCAATGTTGCTAACATAACGCTTAAATCAGCTACCGAAGCAGTGTTTAGAGCTCAATAG 1356 0.4403 MGSRNHEVSMLMENGGGGNIVKGLSKEMRHGRTAHNMSSSSLHKKSDLTLVSKVHSIPLRNVLVNLQEVVLGTKLSILFPAIPLAVVAQCYGFGRPWIFALSLLGLTPLAERVSFLTEQLAYYTGPTVGGLLNATCGNATELIIAIFALSNNKIHVVKYSLLGSIISNLLLVLGTSLFCGGIANIRKEQKYDRRQADINLLMLFVALLCHLLPVLFHYVGASAADTAESSLQLSRAASIVMVIAYCAYLVFQLWTHRQLFEAQDEVDEEGGNESEEAVIGFWSAFAWLVGMTVIIALLSEYVVQTIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVSLGSATQISMFVVPLCVIVAWIMGIKMDLNFNILETGSFAVAITITAFTLQDGTSHYMKGLVLLLCYIVIGACFFVQRTPSNVANITLKSATEAVFRAQ* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0476 451 Pfam Sodium/calcium exchanger protein 284 422 IPR004837 GO:0016021|GO:0055085
Gso3g0476 451 Pfam Sodium/calcium exchanger protein 97 254 IPR004837 GO:0016021|GO:0055085
Gso3g0476 451 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 1 440 - -
Gso3g0476 451 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 440 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso3g0476 451 Gene3D - 278 427 IPR044880 -
Gso3g0476 451 Gene3D - 126 277 IPR044880 -
Gso3g0476 451 TIGRFAM caca2: calcium/proton exchanger 61 427 - -
Gso3g0476 451 TIGRFAM cax: calcium/proton exchanger 80 427 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0476 Gso-Chr3 8580708 8585692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0476 13 434 Antiporters AT2G38170 71.831 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0476 K07300 - gmx:100782052 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0476 3 8580708 8585692 Gso3g0476 3 8580708 8585692 ECH