Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0475 ATGGCTTCTCGAAACCATGAGGTATCAATGGTAAAGGAGAATGGTGGTGGTGGGAACAACCTGAAGGGGTTGAGCAAGGAAATGAGACATGGCAGAACGGCACATAACATGTCATCATCTTCTTTGCGCAAGAAATCTGACCTAACTCTTGTGTCTAAGGTTTGCTCTGGCCATGTAAGGAATGTGTTGGTGAATTTGCAAGAGGTTATTCTTGGAACCAAGCTCTCTATTCTTTTCCCTGCCATTCCCCTAGCCATTGTTGCTGAAGGCTATGGCTTTGGAAGATCTTGGGTTTTTGTGTTGAGTTTACTTGGGCTCACACCACTTGCGGAACGAGTCAGCTTCTTGACAGAACAAGTTGCTTTTTACACTGGTCCTGCAGTGGGAGCACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCATAGCAATTTTTGCCCTTAGCCATAACAAAATTGCTTTGGTCAAATATTCTCTCTTGGGTTCCATAATTTCTAACCTTCTTCTGGTTCTTGGAACCTCTCTATTCATTGGTGGCCTAGCAAATCTTAGTCAGGAACAAAAATACGACAGAAAACAAGCAGATATGAACTTGCTTATGTTGTTTGTGGCATTGCTTTGCCACTTGCTGCCATTGTTGTTTCATTATGTTGGTGCCTCAGCAGCTGACACTGGAGACTCATCTCTGCAGTTGTCAAGAGCTGCTAGCATTGTTATGGTGATTGCATATTGTGCTTACCTTGTCTTCCAACTGTGGACTCACAGGCAGCTATTTGAAGCCCAGAATGAAGATGATGAAGAGGGTGGCAGTGATTCAGAAGCAGTGATAGGATTCTGGAGTGGGTTTACTTGGCTGGTTGGGATGACTATGACCATTGCTTTGTTGTCTGAATATGTGGTGCAAACAATTGAGGATGCATCTGATTCATGGGGTTTGTCTGTTAGCTTCCTTAGCATAATCTTGCTTCCAATTTTTGGCAATGCAACTGAACATGCAGCAGCAATCATATTTGGTTTCAAGAACAAACTGGACATCTCTTTGGGTGTTTCTTTGGGTTCTTCAACTCAAATTAGCATGTTTGTGGTTCCCCTATGTGTGATTGTTGCTTGGATTATGGGTATCAAAATGGACCTCAACTTCAACCTCCTAGAAACAGCTTCTCTTTCTTTGGCAATAACAATCACAGCCTTCGCATTACAGGATGGAACTTCTCACTACATGAAAGGCCTTGTTCTCATACTCTGCTATATTGTTATTGGGGCATGCTTTTTCGTACAAAGAACACCCCCTAGCATATTGCTGGTTTTGGTTTCTGTGAGATAA 1329 0.4274 MASRNHEVSMVKENGGGGNNLKGLSKEMRHGRTAHNMSSSSLRKKSDLTLVSKVCSGHVRNVLVNLQEVILGTKLSILFPAIPLAIVAEGYGFGRSWVFVLSLLGLTPLAERVSFLTEQVAFYTGPAVGALLNATCGNATELIIAIFALSHNKIALVKYSLLGSIISNLLLVLGTSLFIGGLANLSQEQKYDRKQADMNLLMLFVALLCHLLPLLFHYVGASAADTGDSSLQLSRAASIVMVIAYCAYLVFQLWTHRQLFEAQNEDDEEGGSDSEAVIGFWSGFTWLVGMTMTIALLSEYVVQTIEDASDSWGLSVSFLSIILLPIFGNATEHAAAIIFGFKNKLDISLGVSLGSSTQISMFVVPLCVIVAWIMGIKMDLNFNLLETASLSLAITITAFALQDGTSHYMKGLVLILCYIVIGACFFVQRTPPSILLVLVSVR* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0475 442 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 432 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso3g0475 442 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 1 432 - -
Gso3g0475 442 TIGRFAM caca2: calcium/proton exchanger 61 426 - -
Gso3g0475 442 MobiDBLite consensus disorder prediction 1 22 - -
Gso3g0475 442 Gene3D - 126 426 IPR044880 -
Gso3g0475 442 Pfam Sodium/calcium exchanger protein 97 254 IPR004837 GO:0016021|GO:0055085
Gso3g0475 442 Pfam Sodium/calcium exchanger protein 284 421 IPR004837 GO:0016021|GO:0055085
Gso3g0475 442 TIGRFAM cax: calcium/proton exchanger 80 426 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0475 Gso-Chr3 8528575 8542016 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0475 1 436 Antiporters AT2G38170 67.347 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0475 K07300 - gmx:100782052 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1614 18 47712874 47717045 Gso3g0475 3 8528575 8542016 PCT
Gso7g1267 7 18008394 18012677 Gso3g0475 3 8528575 8542016 PCT
Gso3g0475 3 8528575 8542016 Gso18g1614 18 47712874 47717045 PCT
Gso3g0475 3 8528575 8542016 Gso7g1267 7 18008394 18012677 PCT