Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0470 ATGTTTGTTTATTTCCTTTATAACCTTCATCCTTTCTTCTACCTGAAAGTTCCCGAAATCCCATTCTCGAACTCGCGACTCTTCCCTCATGCCAATGATCCTCTTCTTCGAGAGTTTGAGCTTGGGGAGCGTCGACCGGGTGCAGGCATACAAAGATGCAAAAGTAAGTGGCAAAAGACAAATGAAAGCTCAGAGAACCAATGGTTTTGGTCCTTAACAGATTTTTATTTTATCATCCCAAACAAGTCAAACCAAATCCTTCAGAGCAACACATTCTTGCCAAAAGATGCTTCCACAACTATTAACTCAGAGGGCTTTGTTCTCCTTGATATTAGGCCAACTTGGGAGAGAGAGAAGGCACGTGTGGCAGGGTCTTTGCACGTGCCAATGTTTGTGGAGGACACTGATAACAGTCCAATAACTCTGCTTAAGAAGTGGGTGCATTTTGGGTACATTGGGTTGTGGACTGGCCAGTACCTCACTACTTTGAATTCTGAGTTCCTTAGTCAAGTGGAAAATTCCATTCCTACAGGTAAGGAGACCAAGCTTCTTGTGGCGTGTGGAGGAGGATTAAGGTCAATGGCAGCAGCTTCAAAACTATACAATGGAGGTTACAAAAATCTTGGATGGTTGGCTGGAGGCTTTAATCTTTCAAAGAACAATGACTTCCCAACAGTAGAAGGAAAAGAAAAGTTGCAGCATGCAACTGTAGGGGGTGCTTCTTATTTCTAA 732 0.4317 MFVYFLYNLHPFFYLKVPEIPFSNSRLFPHANDPLLREFELGERRPGAGIQRCKSKWQKTNESSENQWFWSLTDFYFIIPNKSNQILQSNTFLPKDASTTINSEGFVLLDIRPTWEREKARVAGSLHVPMFVEDTDNSPITLLKKWVHFGYIGLWTGQYLTTLNSEFLSQVENSIPTGKETKLLVACGGGLRSMAAASKLYNGGYKNLGWLAGGFNLSKNNDFPTVEGKEKLQHATVGGASYF* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0470 243 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 84 243 IPR044614 -
Gso3g0470 243 Gene3D - 89 236 IPR036873 -
Gso3g0470 243 SMART rhod_4 92 224 IPR001763 -
Gso3g0470 243 CDD RHOD 96 216 - -
Gso3g0470 243 ProSiteProfiles Rhodanese domain profile. 102 227 IPR001763 -
Gso3g0470 243 Pfam Rhodanese-like domain 94 216 IPR001763 -
Gso3g0470 243 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 94 229 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0470 Gso-Chr3 8453092 8466275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0470 94 243 Sulfurtransferasese or Rhodanese AT3G08920 62.667 9.00e-69 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0470 - - gsj:114404917 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0470 3 8453092 8466275 Gso3g0470 3 8453092 8466275 ECH