Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0460 ATGGAGGGTACTCATCATCTTCGTCATCTGCATCAACAACAACAACAAAAACAAAGGGTTCTTCCTCAGAGTATGAGTAGTGTCAACGTGGATGTGACTGATAGGTTTCCCCAATGGAGCATCCAAGAAACAAAAGAGTTTCTTGTGATCCGTGCAGAGCTGGATCAGACTTTCATGGAGACTAAGAGGAACAAACAGTTGTGGGAAGTGATATCCAACCGAATGAAGGAAAAGGGTTACCATAGAAGTGCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTTACTCGCTATAAGGGATTTGAAACAATGGAGCAAGAAGCGACGAGACAGCAATTCCCATTTTACAATGAATTCAATGCAATTTTCACGGCAAGGATGCAGAGAATGTTGTGGGCTGAAGCTGGGGGTGGATCGAAGAAGAACAAGGCGATGACGATGCAGCTCTCATCGGACGAAGAAGATGGCAAAGAAGAGAGTACTGAAGCCGGTAGCGACAGAAAGAAGAAAAAGGCAAAGATAGTTAGTGGGGGTGGTGGTAGTTTGAACAATTTGAAGGAGATTTTGGAGGATTTCATGAGGCAACAGATGCAAATAGAAGCACAATGGATGGTGGCGTTCGAGGCGAGGGAGAATGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAGCCATGGAGGTGTTGGAGAATGAGAGGATAATGATGGAAGAAAGATGGAGAGAAAGGGAGGAACAAAGGAGGATTAGGGAAGAAGCTAGGGCTGAGAAGAGGGATGCACTAATCACAGCTTTGCTAAACAAGCTAGAGAGACAAGGAATGTAG 822 0.4538 MEGTHHLRHLHQQQQQKQRVLPQSMSSVNVDVTDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGYHRSAEQCKCKWKNLVTRYKGFETMEQEATRQQFPFYNEFNAIFTARMQRMLWAEAGGGSKKNKAMTMQLSSDEEDGKEESTEAGSDRKKKKAKIVSGGGGSLNNLKEILEDFMRQQMQIEAQWMVAFEARENERRLKEMEWRQAMEVLENERIMMEERWREREEQRRIREEARAEKRDALITALLNKLERQGM* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0460 273 MobiDBLite consensus disorder prediction 1 24 - -
Gso3g0460 273 PANTHER - 1 273 - -
Gso3g0460 273 Coils Coil 182 202 - -
Gso3g0460 273 CDD GT1 37 100 - -
Gso3g0460 273 MobiDBLite consensus disorder prediction 141 175 - -
Gso3g0460 273 Gene3D - 39 100 - -
Gso3g0460 273 Pfam Myb/SANT-like DNA-binding domain 38 122 IPR044822 -
Gso3g0460 273 ProSiteProfiles Myb-like domain profile. 39 95 IPR001005 -
Gso3g0460 273 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 273 - -
Gso3g0460 273 MobiDBLite consensus disorder prediction 147 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0460 Gso-Chr3 8094393 8096505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0460 9 272 Trihelix Transcription Factor Family AT2G38250 55.435 8.72e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso3g0460 Myb_DNA-bind_4 4.8e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0460 3 8094393 8096505 Gso3g0460 3 8094393 8096505 ECH