Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0458 ATGGCCAAGCCACAGAAACCACAACCAAAACCGGGGTGTTTCTCTTTCTCCAGCTTCCTACGTGTGCTTCTATGTGCTGGAAATGGAACTAGTCCACCAGTGCACCCTTATCACATCACAGAATCAGATGAATCAAAAAATGCACATTTCACCAAAGAAAAAATGGTGGTGAATGATAATGGTAATGATGATATTTCTGCCCCTGGAGTTGTGGCAAGGCTAATGGGTTTGGATTCACTTCCGAACCCCAAATGGGTGGTGAAATGTGGTAGTGGCAGCATCCCAGATTCTGTTCCTAGAAGCAGGTCAGTGAACTTTGTTGACTACTTGCTTGAGTTTGATGCTAGCCATGTTAGTAGCCATAGGAGGGTGAAGACTTCAACATCGTTCAGAGAGGTTCCTAGTTTGGTTCAGAACCAAAAGGGTAACAATGGTAATAATCTCTTTGTGTTTTGCATGGATGGTGATGGTAACATGAGGGAAGAGAAAGAGGGTAGAAATGAGATGAGGGAAGTGGAAGAGTTGAGGCAGAGGAAGAGGCAGGGGAGTAATAAGAACAAAGAGAGTGTGAGTGTGAAGAAAGAGAGAAATCAAGGGAAGAAGAACAAGAAGATTTCCAAGCTGAAGAATGAACCAAGGAGGGTACCTTCTTCTAAGAATGGTTCAAAGGGTCTAACTCGAAACCATCATGGGGAGGTTAAAGATTTGTCATCTGTGTCCTCAAACTCCTCTAAGTGTAGTAGTTCTTGTAGTAGTAGTAGAAAAAATGGTGTTAGTTCAAGATCAAGGTTCAACACTTCTTTGTCAAATGCACACAAGAAGGGGGTTGCGGAACCAAAATTCAGGAAGAACATGAGAAATCAGAATCCAGTGTTGAAGGAAGAAAGTGAATGCAGGTTGGAAAATCACAGTCCAGTTTCAGTTGTAGAGAGCAATGACTACTATCCTTTCCTTTATGGAACTGATTTTCAAGATGGTCCAAGCTCCGTTGCTTCAAAGTCAAAAAAGTGGGGATCTCCATCACTTTTGTCATTGGGTGAAGAAGTTGAAGACAGTGCAAGTACTAATGAAGGTTATACCTTCATTGATGTCAACAAGGAAGCAGAGTATTACTCAGAATTGATGTTGAAGCTTCGTACTTTGACTGAACAGGATATAAGAGAATCAGATTGTACCTCAAAACGTGTACGCGAGACTGAAAACTTTGGGGATATTTGTTTGATGTTTGAGCATAAAATTTTCGACCATTTATTATATGAAGTTGTCAATGAAGTTTTAGAACTTTATTATTGA 1293 0.4076 MAKPQKPQPKPGCFSFSSFLRVLLCAGNGTSPPVHPYHITESDESKNAHFTKEKMVVNDNGNDDISAPGVVARLMGLDSLPNPKWVVKCGSGSIPDSVPRSRSVNFVDYLLEFDASHVSSHRRVKTSTSFREVPSLVQNQKGNNGNNLFVFCMDGDGNMREEKEGRNEMREVEELRQRKRQGSNKNKESVSVKKERNQGKKNKKISKLKNEPRRVPSSKNGSKGLTRNHHGEVKDLSSVSSNSSKCSSSCSSSRKNGVSSRSRFNTSLSNAHKKGVAEPKFRKNMRNQNPVLKEESECRLENHSPVSVVESNDYYPFLYGTDFQDGPSSVASKSKKWGSPSLLSLGEEVEDSASTNEGYTFIDVNKEAEYYSELMLKLRTLTEQDIRESDCTSKRVRETENFGDICLMFEHKIFDHLLYEVVNEVLELYY* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0458 430 MobiDBLite consensus disorder prediction 235 272 - -
Gso3g0458 430 PANTHER OS05G0128300 PROTEIN 1 429 - -
Gso3g0458 430 MobiDBLite consensus disorder prediction 160 278 - -
Gso3g0458 430 Coils Coil 158 178 - -
Gso3g0458 430 Pfam DUF761-associated sequence motif 65 82 IPR032795 -
Gso3g0458 430 MobiDBLite consensus disorder prediction 160 196 - -
Gso3g0458 430 PANTHER ALC-INTERACTING PROTEIN 1 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0458 Gso-Chr3 8072514 8074633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0458 5 425 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 28.298 2.20e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0458 - - gmx:102668583 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0458 3 8072514 8074633 Gso3g0458 3 8072514 8074633 ECH