Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0439 ATGTTGATTGCTGAAAAGTTAATAGATCTCCTAGTGAAGCATTGGAGGGAAACACTGTGTGAGGCACTTTGTGAGGCTGTTAGTTTCTCAGATGGTGCATACTTATATTCCAGAGAATTTGAGATCGGTTTTAAAATAGAACTGCTTGTGGAGCATTGGAGTGAGGCAATTTGCGAGGCGGTTGGCATCTCGGGGGGTGCACACCTAAATTCCAAAGGGGAAATGAAGCTTGCCTATGAGATAAACCTCCTCGTGAAGCATTGGAGGGAGGCACATTGTGAGGTTCCTGGCATCTCAGGGGGTGTAGTCTTAAATTCCATTGTTGAAGAGGAGATCAGAAAAGATTTTGAGGTCCTTCTAATTCATTGGAAGGAAGCACTTCATAAGGCTGCTAGCATCTTGAGGGGAAAAGTGAAGATTGTTGATAAAGAGATAAACATCCTCGTGAAACGTTGGGCAGAGGCACTTCGTGAGGCTGCTAGTATCTCAGGGATTGTAGTCCTAAATTCCAGGAATGAAAGTGAGGCTATCAAAACTATTGTTGAAAATGTTAAGCGTTTGTTAGACAAGACAGAGTTGTTCGTTGCTGATAATCCAGTCGGCGTAGAACCACGAGTCCAGGAAATGATTGAACTATTAGGCCAAAAACAATCAAACGATGTTCTACTACTCGGGATGTGGGGGATGGGAGGCATTGGTAAAACAACTATTGAAAAAGCCATTTACAATAAGATTGGCCGCAATTTTGAGGGAAAAAGCTTCCTCGCACATATTAGGGGAATTTGGGAGCAAGATGCTGGTCAAGTATATCTACAAGAACAACTTCTATTTGATATCGAAAAAGAAACAAACACAAAGATACGTAATGTTGAATCAGGAAAAGTTATGTTAAAAGAACGACTTCGCCATAAAAAGGTACTTCTTATACTTGATGATGTAAATAAATTGCATCAATTGAATGTTTTGTGTGGAAGTCGTGAATGGTTTGGTTCAGGGAGTAGAATAATCATCACAACTAGAGATATGCATATACTTAGAGGGAGAAGAGTTGACAAAGTGTTCAGAATGAAAGGACTGGATGAAGATGAATCTATTGAGCTTTTTAGTTGGCATGCATTTAAGCAAGCAAGTCCAAGAGAAGATTTTATTGAACTTTCTAGAAATTTAGTTGCTTATTCTGCGGGATTGCCACTAGCTCTTGAAGTCCTTGGGTCCTATTTGTTTGATATGGAGGTAACAGAGTGGAAGAATGTATTGGAGAAACTCAAGAAAATTCCTAATGATGAAGTACAAGAGAAATTAAAAATAAGCTATGATGGTTTAACTGATGATACAGAGAAAGGAATATTCCTTGATATAGCTTGTTTCTTTATCGGAATGGACCGGAATGATGTTATACATATCTTAAATGGTTGTGGGCTTTGTGCAGAAAATGGAATACGTGTCTTGGTAGAAAGAAGCCTTGTAACTGTAGATTATAAGAACAAGCTTGGAATGCATGATTTGCTGCGAGACATGGGAAGAGAAATCATTCGTTCAGAAACACCAATGGAGCTTGAGGAGCGTAGTAGGTTATGTTTTCATGAAGATGCACTTGATGTATTATCAAAAGAAACTGGAACAAAAGCTATTGAGGGTCTGGCTTTGAAGTTACCAAGAAATAATACAAAATGTTTGAGCACTAAAGCTTTTAAGGAGATGAAAAAACTCAGGTTGCTTCAACTTGCTGGTGTACAACTGGTTGGAGATTTCAAGTATCTTTCCAAAGATCTTAGATGGCTTTGTTGGCATGGATTTCCTTTAGCATGCATACCAACAAACCTTTATCAAGGAAGTCTAGTTTCCATTGAGCTACAAAACAGCAGTGTTAATCTTTTGTGGAAAGAAGCCCAGGTAATGGAGAAGTTGAAAATTCTTAATCTCAGTCATTCTCATTATTTAACTCAGACTCCAGACTTTTCAAATTTGCCTAATCTTGAAAAGCTATTACTCGTAGATTGTCCAAGGTTGTCCGAGATTTCCTATCCCATTGGACATCTCAATAAAGTTCTTCTATTAAATTTTCAAAATTGTATTAGCCTTCGTAAGCTTCCAAGAAGTATCTATAAGTTGAAATCTCTTAAAGCACTCATTCTTTCAGGATGTTTAAAGATTGACAAGTTAGAAGAGGATTTGGAACAAATGGAGTCTTTGACAACCCTTATTGCGGATAAGACTGCAATAACAAGAGTGCCATTTTCAATAGTTAGATCAAAAAGAATTGGATATATCTCTTTGTGCGGCTATGAAGGATTCTCACGTGATGTGTTTCCTTCAATCATTTGGTCTTGGATGTCACCAACAAATAGTCTCTCATCCCGCGTTCAAACATTTCTAGATGTGTCATCTCTCGTTTCTTTAGACGTGCCAAATAGTAGTTCCAATCATCTATCATATATTTCTAAGGACCTTCCACTGCTTCAAAGTCTTTGTATAGAGTGTGGCTCAGAACTTCAACTTTCTCTAGATGCTGCAAATATTTTGGATGCTTTATATGCCACAAATTTTGAAGAATTAGAATCAACTGCAGCCACATCGCAAATGCATAATATGAATGTTTTAACATTAATTGAATGCAACAATCAAGTACACAACTTAGGATCAAAAAATTTCAGGAGATCACTTTTAATTCAAATGGGAACGAGTTGTCAAGTCACCAATATTCTGAAACAGAGAATTTTACAGAATATGACAACTAGTGATGGTGGTGGTGGTTGTTTGCTCCCCGGTGATAGCTATCCAGATTGGTTAACCTTCAACAGCGAAGGTTCATCCCTGACTTTTGAAATCCCTCAAGTGAATGGGCGTAACTTGAAGAAAATGATGTGCCATGTCCATTATTCTTCCCCGGAAAATATAACTTCAGATGGTTTGAAACATTTGTTGGTGATAAATCACACAAAGGCCATCATTCAACTTTATAAGAGAAATGCATTAGTCTCCTTTGAAGATGAGGAGTGGCAGGGGGTACTATAA 3015 0.3794 MLIAEKLIDLLVKHWRETLCEALCEAVSFSDGAYLYSREFEIGFKIELLVEHWSEAICEAVGISGGAHLNSKGEMKLAYEINLLVKHWREAHCEVPGISGGVVLNSIVEEEIRKDFEVLLIHWKEALHKAASILRGKVKIVDKEINILVKRWAEALREAASISGIVVLNSRNESEAIKTIVENVKRLLDKTELFVADNPVGVEPRVQEMIELLGQKQSNDVLLLGMWGMGGIGKTTIEKAIYNKIGRNFEGKSFLAHIRGIWEQDAGQVYLQEQLLFDIEKETNTKIRNVESGKVMLKERLRHKKVLLILDDVNKLHQLNVLCGSREWFGSGSRIIITTRDMHILRGRRVDKVFRMKGLDEDESIELFSWHAFKQASPREDFIELSRNLVAYSAGLPLALEVLGSYLFDMEVTEWKNVLEKLKKIPNDEVQEKLKISYDGLTDDTEKGIFLDIACFFIGMDRNDVIHILNGCGLCAENGIRVLVERSLVTVDYKNKLGMHDLLRDMGREIIRSETPMELEERSRLCFHEDALDVLSKETGTKAIEGLALKLPRNNTKCLSTKAFKEMKKLRLLQLAGVQLVGDFKYLSKDLRWLCWHGFPLACIPTNLYQGSLVSIELQNSSVNLLWKEAQVMEKLKILNLSHSHYLTQTPDFSNLPNLEKLLLVDCPRLSEISYPIGHLNKVLLLNFQNCISLRKLPRSIYKLKSLKALILSGCLKIDKLEEDLEQMESLTTLIADKTAITRVPFSIVRSKRIGYISLCGYEGFSRDVFPSIIWSWMSPTNSLSSRVQTFLDVSSLVSLDVPNSSSNHLSYISKDLPLLQSLCIECGSELQLSLDAANILDALYATNFEELESTAATSQMHNMNVLTLIECNNQVHNLGSKNFRRSLLIQMGTSCQVTNILKQRILQNMTTSDGGGGCLLPGDSYPDWLTFNSEGSSLTFEIPQVNGRNLKKMMCHVHYSSPENITSDGLKHLLVINHTKAIIQLYKRNALVSFEDEEWQGVL* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0439 1004 PRINTS Disease resistance protein signature 223 238 - -
Gso3g0439 1004 PRINTS Disease resistance protein signature 300 314 - -
Gso3g0439 1004 PRINTS Disease resistance protein signature 393 407 - -
Gso3g0439 1004 PRINTS Disease resistance protein signature 631 647 - -
Gso3g0439 1004 Gene3D - 358 442 IPR042197 -
Gso3g0439 1004 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 114 1003 IPR044974 GO:0006952
Gso3g0439 1004 Pfam NB-ARC domain 205 432 IPR002182 GO:0043531
Gso3g0439 1004 Gene3D Ribonuclease Inhibitor 537 769 IPR032675 -
Gso3g0439 1004 SUPERFAMILY L domain-like 548 877 - -
Gso3g0439 1004 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 453 IPR027417 -
Gso3g0439 1004 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 114 1003 - -
Gso3g0439 1004 Coils Coil 718 738 - -
Gso3g0439 1004 SUPERFAMILY "Winged helix" DNA-binding domain 428 532 IPR036390 -
Gso3g0439 1004 Gene3D - 189 352 IPR027417 -
Gso3g0439 1004 Gene3D - 105 188 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0439 Gso-Chr3 7556189 7585161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0439 150 748 WRKY Transcription Factor Family AT4G12020 33.496 1.73e-74 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0439 - - gmx:100801314 1974.52