Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0426 ATGATGCACCCTGAAATTCTCGAATCCTCATCATGGTCTTCAATCTACGAAGTCAATAGCTCAACTATTGGTCATCAATTTGAGCACTATGGCTTTGAAGTTGATGCCCATGTGGGTGTTTCAGTATTCAATTCCTTGTTCAACACTCCAGAGAACACTTCCTCGGAAACTTCCATAAACACTTTACCTTCAATCATGTTCACAAATGAATATGATCATTTTTTACACTACCAAATTGAAAAAGACACCCTTCAACTCCCAACATTGATGGACGTCTATGGTTTGTCTATGGATTGTGATGATTTTGATCCCATCTTAAGGGATCATCAAGAAAGTGAAGGAGATTGGAGTCCTACCCCATCTTTGGACTCAGATTTATCATCAAATCAAAAAGCACTTACCTTGCCTCAACAAGGCATGGAAATTGAAAACCAAGTGAGTCTTCCACACATGTTGGAGGCCCTTGGAGAAGCCATATATCAAGGGAAGAAAGCACTAAAAGAAGTGATCTTGAGATGCATGAGGCAGAAAGTTAGTCCACTTTATGAACCTCTTGAGCGTGTTGCTTTCTATTTGTGCCAAGACATGGAAACAAGACAAGATGATTTTTATCTCAAACAAGAGGCTTCCAAGAACTTTGAGGCAGCGTTTAAGGCCTTCTACCAAGGCCTCCCACATGGAAAAGTTGCTCACTTTGTGGCTAATTTGGCAATTCTTGAGGCCTTGCCCCATGATTCTGAAGTCATACACATAGTGGATTTTGACATGGGAGAAGGGTCTCAATGGCCTCCATTGATTGAGTCCATTGCAACCCTTCGCAAAACATTGAAGTTGACAGCAATCAAACGGGGAGAGGAAGGTTCCGAGGTTGTTTCCTCTCCATGGAAATTTGAGGAAATTAAAAGGGTGCTTCATGAGCATGCTAGATCTCGTGATTTGAAGTTGATGGTGGAGGAGAAGGAAATGGAGGAAGTGATTAGTGAGCTTAAGAAAATTAACAAAAGTGTTGGAAGTGGAAAGAGAGATTTTTATGCCTTCAATTGCATGGTGGGTCTTCCTCACATGGGGAGAGGGACTAGTAGAAGGCATGCCACGGAGTTTCTAAATTTGATCAAGAGTTGTGGAAGCAGGGGAATTGTCACTTTTGGAGATGCAAGAGTTTGTGAGAAGTTGGAAAATGACTTGGAATTCGTGTCATTCTTTGAGAGGCATTTGTTGCATTACAAGGCCTTGTTGGAGTCAATTGAATCACATTTCCCAAACCATTTCACAGATGCAAGAAGTGCCATGGAGTGCCTATTTGTGGCACCAAATATCTCTTCCCTTGCTTGGTTGCAAAAGTGGGAAGAGATCAAAGAGGAGTCGGAGTCCTATTTTCAGGCAGATATTGGCTTAGAGGGTTTGAGATTGAGCAATGCAATTTTAATGGAAGTCGGAGAGATGTTGAGTGGAAGTGAACAAGGTTCATATCAAGCCAGGATTGAAGGACAGAATGACAATCAATTGACTTTGGAATGGAAAGGAACCCCTCTAGTAAGAGTTTCAACTTGGAGAAAGATCAAAGGCCAATGA 1572 0.4167 MMHPEILESSSWSSIYEVNSSTIGHQFEHYGFEVDAHVGVSVFNSLFNTPENTSSETSINTLPSIMFTNEYDHFLHYQIEKDTLQLPTLMDVYGLSMDCDDFDPILRDHQESEGDWSPTPSLDSDLSSNQKALTLPQQGMEIENQVSLPHMLEALGEAIYQGKKALKEVILRCMRQKVSPLYEPLERVAFYLCQDMETRQDDFYLKQEASKNFEAAFKAFYQGLPHGKVAHFVANLAILEALPHDSEVIHIVDFDMGEGSQWPPLIESIATLRKTLKLTAIKRGEEGSEVVSSPWKFEEIKRVLHEHARSRDLKLMVEEKEMEEVISELKKINKSVGSGKRDFYAFNCMVGLPHMGRGTSRRHATEFLNLIKSCGSRGIVTFGDARVCEKLENDLEFVSFFERHLLHYKALLESIESHFPNHFTDARSAMECLFVAPNISSLAWLQKWEEIKEESESYFQADIGLEGLRLSNAILMEVGEMLSGSEQGSYQARIEGQNDNQLTLEWKGTPLVRVSTWRKIKGQ* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0426 523 ProSiteProfiles GRAS family profile. 139 518 IPR005202 -
Gso3g0426 523 MobiDBLite consensus disorder prediction 108 128 - -
Gso3g0426 523 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 26 518 - -
Gso3g0426 523 Pfam GRAS domain family 150 518 IPR005202 -
Gso3g0426 523 Coils Coil 315 335 - -
Gso3g0426 523 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 518 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0426 Gso-Chr3 7123825 7125396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0426 174 518 GRAS Transcription Factor Family AT5G66770 29.006 2.20e-19 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso3g0426 GRAS 1.7e-43 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0426 - - gmx:100791800 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0426 3 7123825 7125396 Gso3g0426 3 7123825 7125396 ECH