Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0417 ATGCATCCTTTCAAGAGGTATGTTGAGATCGGGAGGGTTGCCCAAATCAACTACGGCAAGAAATATGGCAGGCTCGTCGTCATTGTCGATGTCATTGACCAGAACAAAGCTCTTGTCGATGCCCCTGATATGGTGAGGTCCCAAGTCAATTTCAAAAGGCTTTCCCTAACTGACATTAAGATTGACATTAAGAGGGTCCCTAAGAAGAAAGATCTTGTTAAAGCCATGGAGGATGTTGTTTCGTTGCTTTTCTATCGATTATTGTTATTGTTAATTTTATCATTAGGTTATAATTGA 297 0.4007 MHPFKRYVEIGRVAQINYGKKYGRLVVIVDVIDQNKALVDAPDMVRSQVNFKRLSLTDIKIDIKRVPKKKDLVKAMEDVVSLLFYRLLLLLILSLGYN* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0417 98 Gene3D - 2 80 IPR014722 -
Gso3g0417 98 CDD KOW_RPL14 8 79 IPR041985 -
Gso3g0417 98 PANTHER 60S RIBOSOMAL PROTEIN L14 3 78 IPR039660 GO:0003723|GO:0003735
Gso3g0417 98 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 3 78 - -
Gso3g0417 98 SUPERFAMILY Translation proteins SH3-like domain 6 78 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0417 Gso-Chr3 7014740 7015745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0417 4 77 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 78.378 1.44e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0417 K02875 - gmx:100499889 147.902