Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0391 ATGGCTGAGTTAGTTGGTGGTGCGTTTCTCTCTGCTTTCCTCAATGTTGTGCTCGACAAGCTTGCTACCGATGAGGTTGTTGACTTCATCCGTGGAAAGAAGGTTGACCTCAATTTGCTTGAGAACTTGAAGAGCACTCTGAGAGTGGTTGGAGCTGTTCTTGATGATGCTGAGAAGAAACAAACCAAACTCTCCAGTGTCAACCAGTGGCTCATTGAGCTCAAGGATGTTCTTTATGATGCCGATGACATGCTGGATGAAATTTCGACCAAAGCTGCAACTCAAAAGAAGGTAAGTAAAGTGTTTTCTCGCTTTATTGATTGGAAAATGGCCAGTAAGTTGGGAAAAGTAGTTGGCAAATTAGATAAAGTTCTAGAAGGCATGAAGGGTCTTCCTTTGCAAGTGATGGCAGGGGAGAGCAACGATCCATGGAAAGCTCTGCCAACAACATCTCTGGAAGATGGATATGGTATGTATGGTAGGGATACAGACAAGGAGGCCATAATGGAGTTGGTAAAGGATAGCAGTGATGGTGTACCAGTGTCTGTTATTGCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTCTGGCCCGATCTGTGTTCAACGATGGCAATTTGAAGGAAATGTTGTTTGATTTAAATGCATGGGTTTGTGTTTCTGATCAATTTGATATTGTGAAGGTCACAAAAACTATGATAGAGCAAATTACGCAAGAGTCATGTAAATTGAATGATCTAAACATGCTTCAACTTGAATTGATGGACAAGCTGAAAGATAAAAAATTCTTAATTGTCTTGGATGATGTATGGATCGAGGATGATGATAATTGGAGTAATCTTACAAAACCATTGTTGCGTGGAACAAGGGGAAGTAAAATTCTCTTTACAACCCGCAATGAAAATGTAGTGAATGTAGTCCCTTACCGTATTGTTCAAGTTTATCCTCTAAGTAAATTGTCAAATGAAGATTGTTGGCTAGTGTTAGCAAACCACGCATTTCCTCTCTCAGAATCAAGTGGGGAGAATAGAAGAGCTTTAGAAGAAATTGGAAGGGAGATTGTTAAAAAGTGTAATGGATTGCCTTTAGCAGCACGGTCACTCGGAGGTATGTTGAGGAGAGAGCATGCTATTAGGGTTTGGAATAATACACTTGAAAGTGACATTTGGAAACTGTCTGAAAGTCAGTGTAAAGTTATTCCAGCCTTGAGAATTAGTTATCAATATCTCCCTCCACATCTGAAACGGTGCTTTGTTTATTGTTCGTTATACCCCAAAGATTATGAATTTCAAAAGAATGACTTGATCTTGTTGTGGATGGCGGAAGATCTTTTGAAGCTTCCAAACAAAGGAAAGGCATTAGAAATTGGTTATGAGTATTTTGATGATTTAGTTTCTAGATCATTTTTTCAACGTTCAAGTAATCGAACTCGGGGCAATTATTTTGTAATGCATGACCTCGTGCATGATCTAGCATTATACCTTGGTGGAGAATTCTATTTCAGATCGGAAGAACTTGGAAAAGAAACCAAGATTGGTATGAAGACTCGTCATTTGTCAGTTACAAAGTTCAGTGATCCAATCTCAGATATTGAAGTTTTTAACAAACTACAATCTTTGAGAACTTTCTTGGCAATTGATTTTAAAGATTCCCCGTTCAGCAATGAAAATGCACCATGTATTGTAGTGTCGAAGCTTAAGTGTTTGAGAGTTTTATCATTTTGTCGCTTTACAAAGCTGGATGTTTTGCCTGATTCAATAGGTATATTGATCCACTTGCGTTATTTAAATCTCTCTCGTACAAGTATAAAAACACTGCCGGAGTCATTGTGTAATTTGTATAATCTACAAACTCTGGTGTTGTCTGAGTGCCACAATTTGACCAGGTTGCTTACTGACATGCAAAATCTTGTAAACTTGTGTCATCTTCATATTGATGATACTCGTATAAGAGAGATGCCTAGAGGAATGGGAATGTTAAGTCATTTGCAGCATTTGGATTTCTTTATTGTGGGCAAGGATAAAGAGAACGGAATCAAAGAACTGGGGACACTTTCAAATCTTCATGGTTCGCTTTCTATTAAGAATTTGGAGAATGTAACCAGAAGCAATGAAGCATTGAAGGCTAGGATGATGGATAAGAAGCACATTAATCATTTATCCTTGGGATGGTCTAATGGCACCGACTTCCAAACTGAATTAGATGTACTGTGCAAATTAAAACCTCACCCAGGCCTGGAATCTCTAACAATACGGCGCTATCATGGAACCATATTTCCAGATTGGGTGGGAAATTTTTCCTACCACAACATGACATGTCTACGTTTATTTGACTGTAATAACTGTTGTGTGCTTCCTTCGCTTGGGCAACTACCGTCTCTTAAGGAGCTCTATATTTCATACTTGAATTCAGTGAAGACTGTTGATGCAGGGTTTTACAACAATGAAGATTGTCCTTCTGTGACTCCCTTTTCTTCCCTTGAAACTCTAGAAATTAAACGCATGTGTTGCTGGGAGTTGTGGAGTATCCCTGAGTCAGACGCCTTTCCTCTACTCAAGTCTCTTACAATAGAGGATTGCCCCAAACTAAGGGGAGATTTGCCAAATCACCTTCCTGCTCTGGAAACACTTACAATTACATATTGCGAGCTTCTTGTCTCTTCTCTCCCTAGGGCTCCCACCCTTAAGAGATTAGAAGTAGAAGGAAGCCAAGTGGTGGAGTCCATGATTAAGGCCATCACCAGCATTGAGCCAACTTGCCTCCAACATTTAAAATTGAGTCATTGTTCGTCAGCCATATCATTTCCAGGTGGTCGTCTGCCTGCATCTCTGAAGGCTCTGGATATCAGCAATCTTAAAAATCTGGAATTGCCGACCCAACACAAGCACGAGTTACTGGAATCACTGGTCCTAGATAATAGTTGTTATTTTCTCAGGTCTCTTCCATTGGTTACTTTTCCAAATCTCAAACGTCTCGAAATCAGATACTGTAAACATCTGAAATCTCTTTTGGTTTCAGGGGCAGAGTCATTTAAGAGTCTGTGTTCTTTGAGCATTTACGAATGCCCCAACTTTGTATCATTCTGTAAAAAAGGATTGCCTGCGCCCAATTTGACTCGAATTGAAGTTGGGCATTGCGACAAGTTGAAGTCATTACCTGACAAAATAAGTAGTCTTCTCCCAAAGTTAGAATATCTCCAAATATCCAACTGCCCAGAAATTGAGTCGTTTCCAGAAGGGGGTATGCCACCTAACCTGAGAACAGTTTGGATTGGGTATTGTGAGAAACTACTGAGCGGCCTAGCATGGCCATCCATGGGCATGCTTACTGATCTCACTGTTTTGGGTCCATGTGGCGGCATCAAGTCCTTCCCTAAGGAGGGTTTGCTGCCTCCCTCCCTTACGTCTTTGAAGCTATATTACTTGTCAAATCTGGAGATGTTGGACTGCACGGGGCTTCTCCATCTCACATCCCTGCAAGAATTAACCATAAAGGGATGTCCTTTGCTGGAGAATATGGTGGGAGAAATGCTTCCTGTCTCTCTAATAAAATTAACCATAGAGAGATGTCCTTTGCTGGAAAAACAATGCCGCAGGAAGCACCCTCAAATTTGGCCTAAAATATCCCACATCCATCACATTAAAGTTGACAATAGATGGATTTAG 3666 0.4048 MAELVGGAFLSAFLNVVLDKLATDEVVDFIRGKKVDLNLLENLKSTLRVVGAVLDDAEKKQTKLSSVNQWLIELKDVLYDADDMLDEISTKAATQKKVSKVFSRFIDWKMASKLGKVVGKLDKVLEGMKGLPLQVMAGESNDPWKALPTTSLEDGYGMYGRDTDKEAIMELVKDSSDGVPVSVIAIVGMGGVGKTTLARSVFNDGNLKEMLFDLNAWVCVSDQFDIVKVTKTMIEQITQESCKLNDLNMLQLELMDKLKDKKFLIVLDDVWIEDDDNWSNLTKPLLRGTRGSKILFTTRNENVVNVVPYRIVQVYPLSKLSNEDCWLVLANHAFPLSESSGENRRALEEIGREIVKKCNGLPLAARSLGGMLRREHAIRVWNNTLESDIWKLSESQCKVIPALRISYQYLPPHLKRCFVYCSLYPKDYEFQKNDLILLWMAEDLLKLPNKGKALEIGYEYFDDLVSRSFFQRSSNRTRGNYFVMHDLVHDLALYLGGEFYFRSEELGKETKIGMKTRHLSVTKFSDPISDIEVFNKLQSLRTFLAIDFKDSPFSNENAPCIVVSKLKCLRVLSFCRFTKLDVLPDSIGILIHLRYLNLSRTSIKTLPESLCNLYNLQTLVLSECHNLTRLLTDMQNLVNLCHLHIDDTRIREMPRGMGMLSHLQHLDFFIVGKDKENGIKELGTLSNLHGSLSIKNLENVTRSNEALKARMMDKKHINHLSLGWSNGTDFQTELDVLCKLKPHPGLESLTIRRYHGTIFPDWVGNFSYHNMTCLRLFDCNNCCVLPSLGQLPSLKELYISYLNSVKTVDAGFYNNEDCPSVTPFSSLETLEIKRMCCWELWSIPESDAFPLLKSLTIEDCPKLRGDLPNHLPALETLTITYCELLVSSLPRAPTLKRLEVEGSQVVESMIKAITSIEPTCLQHLKLSHCSSAISFPGGRLPASLKALDISNLKNLELPTQHKHELLESLVLDNSCYFLRSLPLVTFPNLKRLEIRYCKHLKSLLVSGAESFKSLCSLSIYECPNFVSFCKKGLPAPNLTRIEVGHCDKLKSLPDKISSLLPKLEYLQISNCPEIESFPEGGMPPNLRTVWIGYCEKLLSGLAWPSMGMLTDLTVLGPCGGIKSFPKEGLLPPSLTSLKLYYLSNLEMLDCTGLLHLTSLQELTIKGCPLLENMVGEMLPVSLIKLTIERCPLLEKQCRRKHPQIWPKISHIHHIKVDNRWI* 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0391 1221 Gene3D - 406 493 IPR036388 -
Gso3g0391 1221 Gene3D - 319 405 IPR042197 -
Gso3g0391 1221 SMART LRR_typ_2 590 613 IPR003591 -
Gso3g0391 1221 SMART LRR_typ_2 637 660 IPR003591 -
Gso3g0391 1221 Pfam NB-ARC domain 164 407 IPR002182 GO:0043531
Gso3g0391 1221 PANTHER OS05G0414200 PROTEIN 17 905 - -
Gso3g0391 1221 PANTHER OS05G0414200 PROTEIN 944 1172 - -
Gso3g0391 1221 CDD AAA 164 270 - -
Gso3g0391 1221 SUPERFAMILY L domain-like 483 895 - -
Gso3g0391 1221 Coils Coil 40 60 - -
Gso3g0391 1221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 421 IPR027417 -
Gso3g0391 1221 Gene3D Ribonuclease Inhibitor 915 1217 IPR032675 -
Gso3g0391 1221 Gene3D - 14 123 - -
Gso3g0391 1221 CDD RX-CC_like 12 124 IPR038005 -
Gso3g0391 1221 PANTHER DISEASE RESISTANCE PROTEIN RP 17 905 IPR044974 GO:0006952
Gso3g0391 1221 PANTHER DISEASE RESISTANCE PROTEIN RP 944 1172 IPR044974 GO:0006952
Gso3g0391 1221 SUPERFAMILY L domain-like 909 1207 - -
Gso3g0391 1221 Gene3D Ribonuclease Inhibitor 528 914 IPR032675 -
Gso3g0391 1221 PRINTS Disease resistance protein signature 183 198 - -
Gso3g0391 1221 PRINTS Disease resistance protein signature 257 271 - -
Gso3g0391 1221 PRINTS Disease resistance protein signature 358 372 - -
Gso3g0391 1221 PRINTS Disease resistance protein signature 611 627 - -
Gso3g0391 1221 Pfam Rx N-terminal domain 9 97 IPR041118 -
Gso3g0391 1221 Gene3D - 145 313 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0391 Gso-Chr3 6072719 6088555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0391 181 815 WRKY Transcription Factor Family AT5G45050 23.077 1.29e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0391 - - gmx:106798038 2150.55