Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0387 ATGGAAGATTGGCCTGTAGAAACTGCACCTGTCAATGGATATGAATTTAACTTTGAACTAGATCTAAATGGAACTTGGCAAAGGGAGGAGGAAGCAAGGGTGTGGTCTGATGATGGCAGTGTTTTGGATAAGGAGAGTCAGGAACAACGAGAAACTCAACAGAATAAAATTGTTCCACGCCACCATCTTGAGCATAGCACCAGCAACTCCCTGAGCATACAGGCCTTAAGCCATGACTTGGCTGGTTCGGATAGTTGTGGTGAAGTCCATGTTGAGGATAACCAAAACATGTCCTTTCCTTCGTGGGAGGGAACCTTTATGAGGTGCTTCAGTGAAATAGATGAAAAGCTTGCTAAGAACATTGACACTAATGGATTTCTTGGCGGTAGCACTTCTGTATCTGTAATCAAACAGAGTGACCAAGTAATAATTGGCAATGTGGGGGATTCTTGTGCAGTTCTTTGCAGAAGAGCACCTGACAATCACCTTATTCCTGTTCAACTTACTGTTGACTTGGCTCCAGATATTCCAAGAGAAGCTTTGAGAATTTTTGCTGTAGAAGAAGATCCTACTGTAAACAGAGTATGGATGCCTGAAAGGGACTGCCCTGGACTGGCTATGATTTCGGATGTGCTAACAAACAGTGAAGTAATAAACATAGTTGCTTCAGCACCAAAAAGGTCCATGGCTGCCAAATTGTTTGTAAACCATGCTGTTCGGGCTTTGAAATATAAGTATGGTTTCGAGGTTGATGATTGTTCATCCATATGCTTCTTCCAGCTGAAGGATTAG 792 0.4268 MEDWPVETAPVNGYEFNFELDLNGTWQREEEARVWSDDGSVLDKESQEQRETQQNKIVPRHHLEHSTSNSLSIQALSHDLAGSDSCGEVHVEDNQNMSFPSWEGTFMRCFSEIDEKLAKNIDTNGFLGGSTSVSVIKQSDQVIIGNVGDSCAVLCRRAPDNHLIPVQLTVDLAPDIPREALRIFAVEEDPTVNRVWMPERDCPGLAMISDVLTNSEVINIVASAPKRSMAAKLFVNHAVRALKYKYGFEVDDCSSICFFQLKD* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0387 263 Gene3D - 38 209 IPR036457 -
Gso3g0387 263 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 85 207 - -
Gso3g0387 263 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 208 259 - -
Gso3g0387 263 ProSiteProfiles PPM-type phosphatase domain profile. 73 260 IPR001932 -
Gso3g0387 263 SUPERFAMILY PP2C-like 97 256 IPR036457 -
Gso3g0387 263 MobiDBLite consensus disorder prediction 33 55 - -
Gso3g0387 263 PANTHER ALPHABET, ISOFORM E-RELATED 85 207 - -
Gso3g0387 263 PANTHER ALPHABET, ISOFORM E-RELATED 208 259 - -
Gso3g0387 263 Pfam Protein phosphatase 2C 92 184 IPR001932 -
Gso3g0387 263 SMART PP2C_4 31 258 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0387 Gso-Chr3 5987518 5992829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0387 106 259 PP2C-type Phosphatase Gene Family AT1G16220 38.000 7.07e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0387 - - gsj:114404870 538.88