Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0385 ATGGCTGAGTTAGTTGGTGGTGCGTTTCTCTCTGCTTTCCTCAATGTTGTGTTCGACAAGCTTGCTACCGATGAGGTTGTTGACTTCTTCCGTGGAAAGAAGGTTGACCTCAATTTGCTTGAGAACTTGAAGAGCAATCTGAGTGTGGTTGGAGCTGTGCTTGATGATGCTGAGAAGAAACAAATCAAACTCTCCAGTGTCAACCAGTGGCTCATTCAGCTCAAGGATGTTCTTTATGATGCCGATGACGTGCTGGATGAAATTTCGACCAAAGCTGCAACTCAAAAGAAGGTAAGTAAAGTGTTTTCTCGCTTTACCAATAGGAAAATGGCCAGTAAGTTGGAAAAAGTAGTTGGCAAATTAGATAAAGTTCTAGAAGGCAAGAAGGGTCTTCCTTTGCAAGTGATGGCAGGGGAGAGCAACGAGCCATGGAATGCTCTGCCAACAACATCTCTGGAAGATGGATATGGTATGTATGGTAGGGATACAGACAAGGAGGCCATAATGGAGTTGGTAAAGGATAGCAGTGATGGTGTACCAGTGTCTGTTATCGCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTCTAGCCCGATCTGTGTTCAACGATGGCAATTTGAAGGAAATGTTGTTTGATTTAAATGCATGGGTTTGTGTTTCTGATCAATTTGATATTGTGAAGGTCACAAAAACTATGATAGAGCAAATTACTCAAAAGTCTTGTAAATTGAATGATCTAAACTTACTTCAACATAAATTGATGGACAGGCTGAAAGATAAAAAATTCTTAATTGTCTTGGATGATGTATGGATCGAGGATGATGATAATTGGAGTAATCTTACAAAACCATTGTTGCATGGAACAAGGGGAAGTAAAATTCTCTTTACAACCCGCAATGAAAATGTAGTGAATGTAGTCCCTTACCGTATTGTTCAAGTTTATCCTCTAAGTAAATTGTCAAATGAAGATTGTTGGCTAGTGTTAGCAAACCACGCATTTCCTCTCTCAGAATCAAGTGGGGAGAATAGAAGAGCTTTAGAAGAAATTGGAAGGGAGATTGTTAAAAAGTGTAATGGATTGCCTTTAGCAGCACGGTCACTCGGAGGTATGTTGAGGAGAGAGCATGCTATTAGGGTTTGGAATAATACACTTGAAAGTGACATTTGGAAACTGTCTGAAAGTCAGTGTAAAGTTATTCCAGCCTTGAGAATTAGTTATCAATATCTCCCTCCACATCTGAAACGGTGCTTTGTTTATTGTTCGTTATACCCCAAAGATTATGAATTTCAAAAGAATGACTTGATCTTGTTGTGGATGGCGGAAGATCTTTTGAAGCTTCCAAACAAAGGAAAGGCATTAGAAATTGGTTATGAGTATTTTGATGATTTAGTTTCTAGATCATTTTTTCAACGTTCAAGTAATCGAACTCGGGGCAATTATTTTGTAATGCATGACCTCGTGCATGATCTAGCATTATACCTTGGTGGAGAATTCTATTTCAGATCGGAAGAACTTGGAAAAGAAACCAAGATTGGTATGAAGACTCGTCATTTGTCAGTTACAAAGTTCAGTGATCCAATCTCAGATATTGAAGTTTTTAACAAACTACAATCTTTGAGAACTTTCTTGGCAATTGATTTTAAAGATTCCCCATTCAACAAGGAAAAGGAACCAGGTATTGTAGTGTCGAAGCTTAAGTGCTTGAGAGTTTTATCATTTTGTGGCTTTGCAAGTCTGGATGTTTTGCATGATTCAATAGGTAAATTGATCCACTTGCGTTATTTAAATCTCTCTCGTACAAGTATAAAAACACTGCCGGAGTCATTGTGTAATTTGTACAATCTACAAACTCTGGTGTTGTCTGATTGCGACAAGTTGACCAGGTTGCCTACTGACATGCAAAATCTTATAAACTTGTGTCATCTTCATATTGATGGTACTGATATAAGAGAGATGCCTAGAGGAATGGGAATGTTAAGTCATTTGCAGCATTTGGATTTCTTTATTGTGGGCAAGCACAAAGAGAACGGAATCAAAGAACTGGGGACACTTTCAAATCTTCATGGTTCGCTTTCTATTAGGAATTTGGAGAATGTAACCAGAAGCAATGAAGCATTGGAGGCTAGGATGCTGGATAAGAAGCACATTAATCATTTATCGTTTCTATGGTCTAATGGCACCGACTTCCAAACTCAATTAGATGTACTGTGCAAATTAAAACCTCACCAAGGCCTGGAATCTCTAACAATATTGGGTTATGATGGAACCATATTTCCAGATTGGGTGGGAAATTTTTCCTACCACAACATGACAAGTCTAAGTTTACGTTATTGTGATAACTGTTGTGTGCTTCCTTCGCTTGGGCAACTACCGTTTCTTAAGGAGCTCTATATTTCAAACTTGGATTCAGTGAAGACTGTTGATGCAGGGTTTTACAAAAATGAAGATTGTCTTTCTGTGACACCGTTTTCTTCCCTTGAAACTCTATCCATTGTTCGCATGTATTGCTTGGAGTTGTGGAGTACCCCTGAGTCAGACGCCTTTCCTCTACTCAAGTCTCTTACAATAGAGAATTGCCCCAAACTAAGGGGAGATTTGCCAAATCACCTTCCTGCTCTGAAAAAACTTAAGATTGCCTCTTCTCTCCCTAGGGCTCCCACTCTTAACAGATTAGAAATACGTAAAAGTAATAATGTATCGTTGCATGTGTTTCCTCTTTTGTTGGAATGGATAGAAGTAGAAGGAAGCCAAATGGTGGAGTCCATGATTAAGGCCATCACCAGCATTGAGCCAACTTGCCTCCAACATTTAAAATTGAGTGATTGTTCGTCAGCCATATCATTTCCGGGTGGTCGTCTGCCTGCATCTCTGAAGGCTCTGCATATCAGCAATCTTAAAAATCTGGAATTGCCGACCCAACACAAGCACGAGTTACTGGAATCACTGTCACTAGTTAATAGTTGTTATTGTCTCAGGTCTCTTCCATTGGCTACTTTTCCAAATCTCAAACGTCTCGAAATCAGATGCTGTGAACATCTGAAATCTCTTTTGGTTTCAGGGGCAGAGTCATTTAAGAGTCTGTGTTCTTTGAGCATTTCCCGATGCCCCAACTTTGTATCATTCTGTAGAAAAGGATTGCCAGCGCCCAATTTGACTCGAATTGAAGTTCGGCATTGCGACAAGTTGAAGTCATTACCTGACAAAATGAGTAGTCTTCTCCCAAAGTTAGAATATCTTCACATAGAGGACTGCCCAGAAATTGAGTCGTTTCCAGAAGGGGGTATGCCACCTAACCTGAGAACAGTTGAGATTGACAATTGTGAGAAACTACTGAGCGGCCTAGCATGGCCATCCATGGGCATGCTTACCCATCTCATTGTTTGGGGTCCATGTGATGGCATCAAGTCATTCCCTAAGGAGGGTTTGCTGCCTCCCTCCCTTACGTCTTTGAAGCTATATTACTTGTTAAATCTGGAGATGTTGGACTGCATGGGGCTTCTCCATCTCACATCCCTGCAAGAATTAACCATAGAGATTTGTCCTTTGCTGGAGAATATGGTGGGAGAAAGGCTTCCTGTCTCTCTAATAAAATTAACCATAGAGAGATGTCCTTTGCTGGAAAAACAATGCCGCAGGAAGCACCCTCAAATTTGGCCTAAAATATCCCACATCCGTCACATTAAAGTTGACAACAGATGGATTTAG 3708 0.4026 MAELVGGAFLSAFLNVVFDKLATDEVVDFFRGKKVDLNLLENLKSNLSVVGAVLDDAEKKQIKLSSVNQWLIQLKDVLYDADDVLDEISTKAATQKKVSKVFSRFTNRKMASKLEKVVGKLDKVLEGKKGLPLQVMAGESNEPWNALPTTSLEDGYGMYGRDTDKEAIMELVKDSSDGVPVSVIAIVGMGGVGKTTLARSVFNDGNLKEMLFDLNAWVCVSDQFDIVKVTKTMIEQITQKSCKLNDLNLLQHKLMDRLKDKKFLIVLDDVWIEDDDNWSNLTKPLLHGTRGSKILFTTRNENVVNVVPYRIVQVYPLSKLSNEDCWLVLANHAFPLSESSGENRRALEEIGREIVKKCNGLPLAARSLGGMLRREHAIRVWNNTLESDIWKLSESQCKVIPALRISYQYLPPHLKRCFVYCSLYPKDYEFQKNDLILLWMAEDLLKLPNKGKALEIGYEYFDDLVSRSFFQRSSNRTRGNYFVMHDLVHDLALYLGGEFYFRSEELGKETKIGMKTRHLSVTKFSDPISDIEVFNKLQSLRTFLAIDFKDSPFNKEKEPGIVVSKLKCLRVLSFCGFASLDVLHDSIGKLIHLRYLNLSRTSIKTLPESLCNLYNLQTLVLSDCDKLTRLPTDMQNLINLCHLHIDGTDIREMPRGMGMLSHLQHLDFFIVGKHKENGIKELGTLSNLHGSLSIRNLENVTRSNEALEARMLDKKHINHLSFLWSNGTDFQTQLDVLCKLKPHQGLESLTILGYDGTIFPDWVGNFSYHNMTSLSLRYCDNCCVLPSLGQLPFLKELYISNLDSVKTVDAGFYKNEDCLSVTPFSSLETLSIVRMYCLELWSTPESDAFPLLKSLTIENCPKLRGDLPNHLPALKKLKIASSLPRAPTLNRLEIRKSNNVSLHVFPLLLEWIEVEGSQMVESMIKAITSIEPTCLQHLKLSDCSSAISFPGGRLPASLKALHISNLKNLELPTQHKHELLESLSLVNSCYCLRSLPLATFPNLKRLEIRCCEHLKSLLVSGAESFKSLCSLSISRCPNFVSFCRKGLPAPNLTRIEVRHCDKLKSLPDKMSSLLPKLEYLHIEDCPEIESFPEGGMPPNLRTVEIDNCEKLLSGLAWPSMGMLTHLIVWGPCDGIKSFPKEGLLPPSLTSLKLYYLLNLEMLDCMGLLHLTSLQELTIEICPLLENMVGERLPVSLIKLTIERCPLLEKQCRRKHPQIWPKISHIRHIKVDNRWI* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0385 1235 SUPERFAMILY L domain-like 483 878 - -
Gso3g0385 1235 PANTHER OS05G0414200 PROTEIN 940 1186 - -
Gso3g0385 1235 PANTHER OS05G0414200 PROTEIN 13 879 - -
Gso3g0385 1235 CDD RX-CC_like 40 124 IPR038005 -
Gso3g0385 1235 Coils Coil 40 60 - -
Gso3g0385 1235 Pfam Rx N-terminal domain 9 99 IPR041118 -
Gso3g0385 1235 SUPERFAMILY L domain-like 891 1221 - -
Gso3g0385 1235 Gene3D - 319 405 IPR042197 -
Gso3g0385 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 421 IPR027417 -
Gso3g0385 1235 Gene3D - 145 313 IPR027417 -
Gso3g0385 1235 Gene3D - 406 493 IPR036388 -
Gso3g0385 1235 Gene3D - 18 125 - -
Gso3g0385 1235 Gene3D Ribonuclease Inhibitor 1096 1218 IPR032675 -
Gso3g0385 1235 Gene3D Ribonuclease Inhibitor 957 1095 IPR032675 -
Gso3g0385 1235 PANTHER DISEASE RESISTANCE PROTEIN RP 940 1186 IPR044974 GO:0006952
Gso3g0385 1235 PANTHER DISEASE RESISTANCE PROTEIN RP 13 879 IPR044974 GO:0006952
Gso3g0385 1235 Pfam NB-ARC domain 164 407 IPR002182 GO:0043531
Gso3g0385 1235 Gene3D Ribonuclease Inhibitor 528 929 IPR032675 -
Gso3g0385 1235 PRINTS Disease resistance protein signature 183 198 - -
Gso3g0385 1235 PRINTS Disease resistance protein signature 257 271 - -
Gso3g0385 1235 PRINTS Disease resistance protein signature 358 372 - -
Gso3g0385 1235 PRINTS Disease resistance protein signature 611 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0385 Gso-Chr3 5961336 5970666 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0385 181 492 WRKY Transcription Factor Family AT5G45050 25.312 1.61e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0385 - - gmx:106798038 2139.38