Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0384 ATGGCATTTTCTTCAATTATGAGTTCAGGAATCGATGTTTTGCTATGGACAGAGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTGTTTAGAGGAAGAGTTGGGATTTGGAGGACTGCTATTGCTATTAAAAGGTTGGATAAGGAAGACAAGGAGTGTGCCAAGGCGTTTTGCAGAGAATTGATGATTGCTAGTTCTCTGAATGACACAAATGTTATTCCTCTTGTGGGGTTTTGTATTGACTCGGAGGAGGGTTTGTTTTTTGTGTACAAGTATGTGTCAGGAGGAAGCTTAGAGCATCACTTACATGGGAGGAAGAAGGGTGTGAAGGGTAGTTCACCACTTCCATGGTCTGTGAGGTATGAAGTTGCAATTGGGATTGCAGAAGCTGTGGCTTATGTGCGTAATGGTATGAAGTTTCATTTTATCATAACTTATCATAATTTTGTAATTCACTCTAAAGACTTATCATATGGGTTTATTTACATAGACAAAGACTTGCCACATATACATATGATTATAAACTATTTTTTACATTTTAATAGGATATGA 552 0.3841 MAFSSIMSSGIDVLLWTERVLGRGALSCVFRGRVGIWRTAIAIKRLDKEDKECAKAFCRELMIASSLNDTNVIPLVGFCIDSEEGLFFVYKYVSGGSLEHHLHGRKKGVKGSSPLPWSVRYEVAIGIAEAVAYVRNGMKFHFIITYHNFVIHSKDLSYGFIYIDKDLPHIHMIINYFLHFNRI* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0384 183 SUPERFAMILY Protein kinase-like (PK-like) 18 152 IPR011009 -
Gso3g0384 183 SMART tyrkin_6 15 183 IPR020635 GO:0004713|GO:0006468
Gso3g0384 183 ProSiteProfiles Protein kinase domain profile. 15 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0384 183 Gene3D Transferase(Phosphotransferase) domain 1 11 157 - -
Gso3g0384 183 Pfam Protein tyrosine and serine/threonine kinase 18 154 IPR001245 GO:0004672|GO:0006468
Gso3g0384 183 PANTHER OS01G0750732 PROTEIN 17 139 - -
Gso3g0384 183 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1 17 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0384 Gso-Chr3 5955550 5956336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0384 20 143 Receptor kinase-like Gene Family AT5G38990 34.677 1.94e-19 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso3g0384 PK_Tyr_Ser-Thr 6.8e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0384 - - gsj:114406049 377.096