Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0383 ATGGCTGAGTTAGTTGGTGGTGCGTTTCTCTCTGCTTTCCTCAATGTTGTGTTCGACAAGCTTGCTACCGATGAGGTTGTTGACTTCTTCCGTGGAAAGAAGGTTGACCTCAATTTGCTGGAGAACTTGAAGAGCACTCTGAGAGTGGTTGGAGGTGTGCTTGATGATGCTGAGAAGAAACAAACCAAACTCTCCAGTGTCAACCAGTGGCTCATTGAGCTCAAGGATGTTCTTTATGATGCCGATGACATGCTGGATGAAATTTCGACCAAAGCTGCAACTCAAAAGAAGGTACGTAAAGTGTTTTCTCGCTTTACCAATAGGAAAATGGCCAGTAAGTTGGAAAAAGTAGTTGGGAAATTAGATAAAGTTCTAGAAGGCATGAAGGGTCTTCCTTTGCAAGTGATGGCAGGGGAGAGCAACGAGCCATGGAATGCTCTGCCAACAACATCTCTGGAAGATGGATATGGTATGCATGGTAGGGATACAGACAAGGAGGCCATAATGAAGTTGGTAAAGGATAGCAGTGATGGTGTACCAGTGTCTGTTATCGCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTCTGGCCCGATCTGTGTTCAACGATGGCAATTTGAAGGAAATGTTGTTTGATTTAAATGCATGGGTTTGTGTTTCTGACCAATTTGATATTGTGAAGGTCACAAAAACTATGATAGAGCAAATTACGCAAGAGTCATGTAAATTGAATGATCTAAACTTTCTTCAACTTGAATTGATGGACAAGCTGAAAGATAAAAAATTCTTAATTGTCTTGGATGATGTATGGATCGAGGATTATGATAATTGGAGTAATCTTACAAAACCATTGCTGCATGGAACAAGGGGAAGTAAAATTCTCTTCACAACCCGCAATGAAAATGTAGTGAATGTAGTCCCTTACCGTATTGTTCAAGTTTATCCTCTAAGTAAATTGTCAAATGAAGATTGTTGGCTAGTGTTTGCAAACCACGCATTTCCTCTCTCAGAATCAAGTGGGGAGGATAGAAGAGCTTTAGAAAAAATTGGAAGGGATATTGTTAAAAAGTGTAATGGATTGCCTTTAGCAGCACGCTCACTTGGAGCTATGTTGAGGAGAAAGCATGCTATTAGGGATTGGGATATTATACTTAAAAGTGACATTTGGGATCTGCCTGAAAGTCAGTGTAAAATTATTCCAGCCTTGAGAATTAGTTATCATTATCTCCCTCCACATCTGAAAAGGTGCTTTGTTTATTGTTCATTATACCCCAAAGATTATGAATTTCAAAAAAATGACTTGATCTTGTTGTGGATGGCTGAAGATCTTTTGAAGCTTCCAAACAATGGAAATGCCTTGGAAATTGGTTACGAGTATTTTGATGATTTAGTTTCAAGATCATTTTTTCAACGTTCAAAAAGTAATCGAACTTGGGACAATTGTTTTGTAATGCATGACCTCGTGCATGATCTAGCATTATACCTTGGTGGAGAATTCTATTTCAGATCGGAAGAACTTGGAAAAGAAACCAAGATTGGTATGAAGACTCGTCATTTGTCAGTTACAAAGTTCAGTGATCCAATCTCAGATATTGATGTTTTTAACAAACTACAATCTTTGAGAACTTTCTTGGCAATTGATTTTAAAGATTCCCGGTTCAACAATGAAAAAGCACCAGGTATTGTAATGTCGAAGCTTAAGTGTTTGAGAGTTTTATCATTTTGTCGCTTTACAATGTTGGATGTTTTGCCTGATTCAATAGGTAAATTGCTCCACTTGCGTTATTTAAATCTCTCTCGTACAAGTATAAAAACACTGCCGGAGTCATTGTGTAATTTGTACAATCTACAAACTCTGGTGTTGTCTCATTGCGACAAGTTGACCAGGTTGCCTACTGACATGCAAAATCTTGTAAACTTGTGTCATCTTCATATTAATGGTACTCGTATAGAAGAGATGCCTAGAGGAATGGGAATGTTAAGTCATTTGCAGCATTTGGATTTCTTTATTGTGGGCAAGCATAAAGAGAACGGAATCAAAGAACTGGGGACACTTTCAAATCTTCATGGTTCGCTTTCTATTAGGAATTTGGAGAATGTAACCAGAAGCAATGAAGCATTGGAGGCTAGGATGCTGGATAAGAAACACATTAGTCATTTATCCTTGGAATGGTCTAATGACACCGACTTCCAAACTGAATTAGATGTACTGTGCAAATTAAAACCTCACCATGGCCTGGAATATCTAACAATAGAGGGTTATAATGGAACCATATTTCCAGATTGGGTGGGAAATTTTTCCTACCACAACTTGAGAATTCTAGGTTTACGTGATTGTAATAACTGTTGTGTGCTTCCTTCGCTTGGGCAACTACCATCTCTTAAGCAGCTCTATATTTCAAGATTGAAGTCAGTGAAGACTGTTGATGCAGGGTTTTACAAAAATGAAGATTGTCCTTCTGTGACACCCTTTTCTTCCCTTGAATTTCTATCCATTGATGAGATGTGTTGCTGGGAGTTGTGGAGTATCCCTGAGTCAGACGCCTTTCCTCTACTCAAGTCTCTTAAAATAGTGGATTGCCCCAAACTAAGGGGAGATTTGCCAAATCACCTTCCTGCTCTGGAAACACTTATGATTAGAAATTGCGAGCTTCTTGTCTCTTCTCTCCCAAGGGCTCCCATCCTTAAGAGATTAGAGATACATAAAAGCAATAATGTATCGTTGCATGTGTTTCCTCTTTTGTTGGAATCGATAGAAGTAGAAGGAAGCCCAATGGTGGAGTCCATGATCGAGGCCATCTCCAGCATCGAGCCAACTTGCCTCCAACGTTTAACATTGATGGATTGCTCGTCAGCCATATCTTTTCCGGGTGGTCGTCTACCTGCATCTGTGAAGGATCTGTGTATCAACAATCTTAAAAATCTGGAATTCCCAACCCAACACAAGCACGAGTTACTGGAATCACTGGTCCTAGATAATAGTTGTGATTCTCTCACGTCTCTTCCATTGGTTACCTTTGCAAATCTCAAAAGTCTCAAAATCGATAACTGTGAACATCTGGAATCTCTTTTGGTTTCAGGGGCAGAGTCATTTAAGAGTCTGTGTTCTTTGAAAATTTTCCGATGCCCCAATTTTGTATCATTCTGGAGAGAAGGATTGCCTGCGCCCAATTTGACTCGAATTGAAGTTTTAAATTGCGACAAGTTGAAGTCATTACCTGACAAAATCAGTAGTCTTCTCCCAAAGTTAGAATATCTCCAAATATCCAACTGCCCAGAAATTGAGTCGTTTCCAGAAGGGGGTATGCCACCTAACCTGAGAACAGTTTGGATTGTCAATTGTGAGAAACTAATGAGCGGCCTAGCATGGCCATCCATGGGCATGCTTACCCGTCTCACTGTTGCGGGTCGATGTGATGGCATCAAGTCCTTCCCTAAGGAGGGTTTGCTGCCTCCCTCCCTTACATCTTTGAAGCTATATAAGTTGTCAAATCTGGAGATGTTGGACTGCACGGGGCTTCTCCATCTCACATCCCTGCAAAAATTAATCATAGAGAGATGTCCTTTGCTGGAGAATATGGTGGGAGAAAGGCTTCCTGTCTCTCTAATAAAATTAACCATAGAGAGTTGTCCTTTGCTGGAAAAACAATGCCGCAGGAAGCACCCTCAAATTTGGCCTAAAATATCCCACATCCGTCACATTAAAGTTGACAATAGATGGATTTAG 3729 0.402 MAELVGGAFLSAFLNVVFDKLATDEVVDFFRGKKVDLNLLENLKSTLRVVGGVLDDAEKKQTKLSSVNQWLIELKDVLYDADDMLDEISTKAATQKKVRKVFSRFTNRKMASKLEKVVGKLDKVLEGMKGLPLQVMAGESNEPWNALPTTSLEDGYGMHGRDTDKEAIMKLVKDSSDGVPVSVIAIVGMGGVGKTTLARSVFNDGNLKEMLFDLNAWVCVSDQFDIVKVTKTMIEQITQESCKLNDLNFLQLELMDKLKDKKFLIVLDDVWIEDYDNWSNLTKPLLHGTRGSKILFTTRNENVVNVVPYRIVQVYPLSKLSNEDCWLVFANHAFPLSESSGEDRRALEKIGRDIVKKCNGLPLAARSLGAMLRRKHAIRDWDIILKSDIWDLPESQCKIIPALRISYHYLPPHLKRCFVYCSLYPKDYEFQKNDLILLWMAEDLLKLPNNGNALEIGYEYFDDLVSRSFFQRSKSNRTWDNCFVMHDLVHDLALYLGGEFYFRSEELGKETKIGMKTRHLSVTKFSDPISDIDVFNKLQSLRTFLAIDFKDSRFNNEKAPGIVMSKLKCLRVLSFCRFTMLDVLPDSIGKLLHLRYLNLSRTSIKTLPESLCNLYNLQTLVLSHCDKLTRLPTDMQNLVNLCHLHINGTRIEEMPRGMGMLSHLQHLDFFIVGKHKENGIKELGTLSNLHGSLSIRNLENVTRSNEALEARMLDKKHISHLSLEWSNDTDFQTELDVLCKLKPHHGLEYLTIEGYNGTIFPDWVGNFSYHNLRILGLRDCNNCCVLPSLGQLPSLKQLYISRLKSVKTVDAGFYKNEDCPSVTPFSSLEFLSIDEMCCWELWSIPESDAFPLLKSLKIVDCPKLRGDLPNHLPALETLMIRNCELLVSSLPRAPILKRLEIHKSNNVSLHVFPLLLESIEVEGSPMVESMIEAISSIEPTCLQRLTLMDCSSAISFPGGRLPASVKDLCINNLKNLEFPTQHKHELLESLVLDNSCDSLTSLPLVTFANLKSLKIDNCEHLESLLVSGAESFKSLCSLKIFRCPNFVSFWREGLPAPNLTRIEVLNCDKLKSLPDKISSLLPKLEYLQISNCPEIESFPEGGMPPNLRTVWIVNCEKLMSGLAWPSMGMLTRLTVAGRCDGIKSFPKEGLLPPSLTSLKLYKLSNLEMLDCTGLLHLTSLQKLIIERCPLLENMVGERLPVSLIKLTIESCPLLEKQCRRKHPQIWPKISHIRHIKVDNRWI* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0383 1242 SUPERFAMILY L domain-like 484 904 - -
Gso3g0383 1242 Pfam Leucine rich repeat 581 626 IPR001611 GO:0005515
Gso3g0383 1242 CDD AAA 164 270 - -
Gso3g0383 1242 Gene3D - 146 313 IPR027417 -
Gso3g0383 1242 PRINTS Disease resistance protein signature 183 198 - -
Gso3g0383 1242 PRINTS Disease resistance protein signature 257 271 - -
Gso3g0383 1242 PRINTS Disease resistance protein signature 358 372 - -
Gso3g0383 1242 PRINTS Disease resistance protein signature 612 628 - -
Gso3g0383 1242 PANTHER DISEASE RESISTANCE PROTEIN RP 966 1194 IPR044974 GO:0006952
Gso3g0383 1242 PANTHER DISEASE RESISTANCE PROTEIN RP 13 903 IPR044974 GO:0006952
Gso3g0383 1242 Pfam Rx N-terminal domain 9 100 IPR041118 -
Gso3g0383 1242 Gene3D Ribonuclease Inhibitor 530 942 IPR032675 -
Gso3g0383 1242 PANTHER OS05G0414200 PROTEIN 13 903 - -
Gso3g0383 1242 PANTHER OS05G0414200 PROTEIN 966 1194 - -
Gso3g0383 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 421 IPR027417 -
Gso3g0383 1242 SMART LRR_typ_2 638 661 IPR003591 -
Gso3g0383 1242 SMART LRR_typ_2 591 614 IPR003591 -
Gso3g0383 1242 Gene3D - 18 124 - -
Gso3g0383 1242 Gene3D - 406 494 IPR036388 -
Gso3g0383 1242 Pfam NB-ARC domain 165 386 IPR002182 GO:0043531
Gso3g0383 1242 Gene3D - 319 405 IPR042197 -
Gso3g0383 1242 Gene3D Ribonuclease Inhibitor 1103 1228 IPR032675 -
Gso3g0383 1242 Gene3D Ribonuclease Inhibitor 943 1102 IPR032675 -
Gso3g0383 1242 SUPERFAMILY L domain-like 931 1228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0383 Gso-Chr3 5921787 5935397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0383 181 816 WRKY Transcription Factor Family AT5G45050 22.600 1.11e-08 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0383 - - gmx:106798038 2508.79