Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0364 ATGGCTGAGGCAGTTGGTGGTGCATTCCTCTCTGCTTTCCTTGATGTTGTGTTCGACAAGCTGTCTACAGATGAGGTTGTTGACTTCATCCGTGGAAAGAAGCTTGACCTCAATTTGCTTGAGAACTTGAAGAGCACTCTGAGAGTGGTTGGAGCTGTGCTTGATGATGCTGAGAAGAAACAAATCAAACTCTCCAGTGTCAACCAGTGGCTCATTGAGGTCAAAGATGCTCTCTATGAGGCCGATGACTTGCTGGATGAAATTTCTACCAAATCTGCAACTCAAAAGAAGGTAAGTAAAGTGCTTTCTCGCTTTACTGATAGGAAAATGGCCAGTAAGTTGGAAAAAATAGTTGACAAATTAGATAAAGTTTTAGGAGGCATGAAGGGTCTTCCTTTGCAAGTGATGGCAGGGGAGATGAACGAGTCATGGAATACTCAGCCAACGACATCACTGGAAGATGGATATGGCATGTATGGTAGGGATACAGACAAGGAGGCCATAATGAAGTTGTTGTTGTCAGATGATAGCAGTGATGGTGTACTAGTGTCTGTGATCGCTATTGTAGGCATGGGTGGGGTTGGAAAAACCACTTTAGCCCGATCTGTGTTCAACAATGACAATTTGAAGCAGATGTTTGATTTAAATGCATGGGTTTGTGTTTCTGATCAATTTGATATTGCTAAGGTCACAAAAACTATGATAGAGCAAATCACGCAAGAGTCATGTAAATTGAATGATCTAAACTTGCTTCAACTTGAATTGATGGACAAACTGAAAGTTAAAAAATTCTTAATTGTCTTGGATGATGTATGGATCGAGGATTATGAGAATTGGAGTAATCTTACAAAACCATTTCTACATGGGAAAAGGGGAAGTAAAATTCTCTTGACGACCCGCAATGAAAATGTAGTGAATGTAGTCCCTTACCATATTGTTCAAGTTTATCCTCTAAGTAAATTGTCAAATGAAGATTGTTGGCTAGTGTTTGCAAACCATGCATTTCCCCCCTCAGAATCAAGTGGGGAGGATAGAAGAGCTTTAGAAGAAATTGGAAGGGAGATTGTTAAAAAGTGTAATGGATTGCCTTTAGCAGCACGGTCACTTGGAGGTATGTTGAGAAGAAAGCATGCTATTAGGGATTGGAATAATATACTTGAAAGTGACATTTGGGAACTTCCTGAAAGTCAGTGTAAAATTATTCCAGCCTTGAGAATTAGTTATCAATATCTCCCTCCACATTTAAAACGATGCTTTGTTTATTGTTCATTATACCCTAAAGATTATGAATTTCAAAAGAATGACTTGATCTTGTTGTGGATGGCTGAAGATCTTTTGAAGCTTCCAAACAGAGGAAAGGCGTTAGAAGTTGGTTACGAGTATTTTGATGATTTAGTTTCTAGATCATTTTTTCAACGTTCAAGTAATCGAACTTGGGGCAATTATTTTGTAATGCATGACCTCGTGCATGATCTAGCATTATACCTTGGTGGAGAATTCTATTTCAGATCAGAAGAACTTGGAAAAGAAACCAAGATTGGTATAAAGACTCGTCATTTGTCAGTTACAAAGTTCAGTGATCCAATCTCAGATATTGAAGTTTTTGACAAACTACAATTTTTGAGAACTTTATTGGCAATTGATTTTAAAGATTCTTCATTCAACAAGGAAAAGGCACCAGGTATTGTAGCGTCGAAGCTTAAGTGCTTGAGAGTTTTATCATTTTCTCGCTTTGCAAGTCTGGATGTTTTGCCTGATTCAATAGGTAAATTGATCCATTTGCGTTATTTAAATCTATCTCATACAAGTATAAAAACACTGCCGGAGTCATTGTGTAATTTGTACAATCTACAAACTCTGGTGTTGTCTGGTTGCAGATTGTTGACCAGGTTGCCTACTGACATGGAAAATCTTGTAAACTTGTGTCATCTTCATATTTATGGTACTCGTATAGAAGAGATGCCTAGAGGAATGGGAATGTTAAGTCATTTGCAGCATTTGGATTTCTTTATTGTGGGCAAGCATAAAGAGAACGGAATCAAAGAACTGGGGACACTTTCAAATCTTCATGGTTCGCTTTCTATTAGGAATTTGGAGAATGTAACCAGAAGCAATGAAGCATTGGAGGCTAGGATGCTGGATAAGAAGCACATTAATGATTTATCCTTGGAATGGTCTAATGGCACCGACTTCCAAACTGAATTAGATGTACTGTGCAAATTAAAACCTCACCAAGGCCTGGAATCTCTAACAATATGGGGTTATAATGGAACCATATTTCCAGATTGGGTGGGAAATTTTTCCTACCACAACATGACATATCTAAGTTTACGTGATTGTAATAACTGTTGTGTGCTTCCTTCACTTGGGCAACTACCGTGTCTTAAGTACCTCGTTATTTCAAAATTGAATTCACTGAAGACGGTTGATGCAGGGTTTTACAAAAATGAAGATTGTTCTTCTGTGACACCCTTTTCTTCCCTTGAAACTCTAGAAATTGATAACATGTTTTGCTGGGAGTTGTGGAGTACCCCTGAGTCAGACGCCTTTCCTCTACTCAAGTCTCTTAGAATAGAGGATTGCCCCAAACTAAGGGGAGATTTGCCAAATCACCTTCCTGCTCTGGAAACACTTAAAATTAAAAATTGCGAGCTTCTTGTCTCTTCTCTCCCAAGGGCTCCCATCCTTAAGGGCTTAGAGATATGTAACAGCAATAATGTATCGTTGAGTCCAATGGTGGAGTCCATGATCGAGGCCATCACCAGCATCGAGCCAACTTGCCTCCAACATTTAACATTGAGTTATTGTTCGTCAGCCATATCTTTTCCGGGTGGTCGTCTACCTGCATCTCTGAAGGATCTGCATATCAGCTATATTAAAAATCTGGAATTCCCGACCCAACACAAACACGATTTACTGGAATCACTGTCACTATACAATAGTTGTGATTCTCTCACGTCTCTTCCATTGGCTACCTTTCCAAATCTCAAAACTCTCCAAATCGAAAACTGTGAAAATATGGAATCTCTTTTGGTTTCAGGGGCAGAGTCATTTAAGAGTCTGTGTTCTTTGAGAATTTGCGGATGCCCCAACTTTGTATCATTCTGGAGAGAAGGATTGCCTGCGCCCAATTTGACTCGAATTGAAGTTTCAAATTGCGACAAGTTGAAGTCATTACCTGACAAAATGAGTAGTCTTTTCCCAAAGTTAGAATATCTTAACATAGGCGACTGCCCAGAAATTGAGTCGTTTCCAGAAGGGGGTATGCCACCTAACCTGAGAACAGTTTGGATTTTCAATTGTGAGAAACTACTGAGCGGCCTAGCATGGCCATCCATGGGCATGCTTACCCATCTCACTGTTGGGGGTCCATGTGATGGCATCAAGTCATTCCCTAAGGAGGGTTTGCTGCCTCCCTCCCTTACATCTTTGAAGCTATATAAGTTGTCAAATCTGGAGATGTTGGACTGCACGGGGCTTCTCCATCTCACATCCCTCCAACAATTATTCATCAGCGGATGTCCTTTGCTGGAGAGTATGGCTGGAGAAAGGCTTCCTGTCTCTCTAATAAAATTAACCATAAGCGGATGTCCTTTGCTGGAAAAACAATGCCGCAGGAAGCACCCTCAAATTTGGCCTAAAATATCCCACATCCGTCACATTAAAGTTGACTATAGATGGATTTAG 3687 0.3998 MAEAVGGAFLSAFLDVVFDKLSTDEVVDFIRGKKLDLNLLENLKSTLRVVGAVLDDAEKKQIKLSSVNQWLIEVKDALYEADDLLDEISTKSATQKKVSKVLSRFTDRKMASKLEKIVDKLDKVLGGMKGLPLQVMAGEMNESWNTQPTTSLEDGYGMYGRDTDKEAIMKLLLSDDSSDGVLVSVIAIVGMGGVGKTTLARSVFNNDNLKQMFDLNAWVCVSDQFDIAKVTKTMIEQITQESCKLNDLNLLQLELMDKLKVKKFLIVLDDVWIEDYENWSNLTKPFLHGKRGSKILLTTRNENVVNVVPYHIVQVYPLSKLSNEDCWLVFANHAFPPSESSGEDRRALEEIGREIVKKCNGLPLAARSLGGMLRRKHAIRDWNNILESDIWELPESQCKIIPALRISYQYLPPHLKRCFVYCSLYPKDYEFQKNDLILLWMAEDLLKLPNRGKALEVGYEYFDDLVSRSFFQRSSNRTWGNYFVMHDLVHDLALYLGGEFYFRSEELGKETKIGIKTRHLSVTKFSDPISDIEVFDKLQFLRTLLAIDFKDSSFNKEKAPGIVASKLKCLRVLSFSRFASLDVLPDSIGKLIHLRYLNLSHTSIKTLPESLCNLYNLQTLVLSGCRLLTRLPTDMENLVNLCHLHIYGTRIEEMPRGMGMLSHLQHLDFFIVGKHKENGIKELGTLSNLHGSLSIRNLENVTRSNEALEARMLDKKHINDLSLEWSNGTDFQTELDVLCKLKPHQGLESLTIWGYNGTIFPDWVGNFSYHNMTYLSLRDCNNCCVLPSLGQLPCLKYLVISKLNSLKTVDAGFYKNEDCSSVTPFSSLETLEIDNMFCWELWSTPESDAFPLLKSLRIEDCPKLRGDLPNHLPALETLKIKNCELLVSSLPRAPILKGLEICNSNNVSLSPMVESMIEAITSIEPTCLQHLTLSYCSSAISFPGGRLPASLKDLHISYIKNLEFPTQHKHDLLESLSLYNSCDSLTSLPLATFPNLKTLQIENCENMESLLVSGAESFKSLCSLRICGCPNFVSFWREGLPAPNLTRIEVSNCDKLKSLPDKMSSLFPKLEYLNIGDCPEIESFPEGGMPPNLRTVWIFNCEKLLSGLAWPSMGMLTHLTVGGPCDGIKSFPKEGLLPPSLTSLKLYKLSNLEMLDCTGLLHLTSLQQLFISGCPLLESMAGERLPVSLIKLTISGCPLLEKQCRRKHPQIWPKISHIRHIKVDYRWI* 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0364 1228 PRINTS Disease resistance protein signature 185 200 - -
Gso3g0364 1228 PRINTS Disease resistance protein signature 258 272 - -
Gso3g0364 1228 PRINTS Disease resistance protein signature 359 373 - -
Gso3g0364 1228 PRINTS Disease resistance protein signature 612 628 - -
Gso3g0364 1228 PANTHER OS05G0414200 PROTEIN 14 875 - -
Gso3g0364 1228 PANTHER OS05G0414200 PROTEIN 951 1181 - -
Gso3g0364 1228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 422 IPR027417 -
Gso3g0364 1228 Pfam Rx N-terminal domain 9 97 IPR041118 -
Gso3g0364 1228 SUPERFAMILY L domain-like 917 1214 - -
Gso3g0364 1228 Coils Coil 40 60 - -
Gso3g0364 1228 Gene3D - 145 314 IPR027417 -
Gso3g0364 1228 Gene3D - 20 124 - -
Gso3g0364 1228 PANTHER DISEASE RESISTANCE PROTEIN RP 951 1181 IPR044974 GO:0006952
Gso3g0364 1228 PANTHER DISEASE RESISTANCE PROTEIN RP 14 875 IPR044974 GO:0006952
Gso3g0364 1228 Gene3D - 320 406 IPR042197 -
Gso3g0364 1228 Pfam NB-ARC domain 162 408 IPR002182 GO:0043531
Gso3g0364 1228 Pfam Leucine rich repeat 581 627 IPR001611 GO:0005515
Gso3g0364 1228 Gene3D - 407 494 IPR036388 -
Gso3g0364 1228 Gene3D Ribonuclease Inhibitor 1088 1217 IPR032675 -
Gso3g0364 1228 Gene3D Ribonuclease Inhibitor 950 1087 IPR032675 -
Gso3g0364 1228 SUPERFAMILY L domain-like 484 904 - -
Gso3g0364 1228 Gene3D Ribonuclease Inhibitor 530 925 IPR032675 -
Gso3g0364 1228 SMART LRR_typ_2 591 614 IPR003591 -
Gso3g0364 1228 SMART LRR_typ_2 638 661 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0364 Gso-Chr3 5636000 5645390 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0364 183 816 WRKY Transcription Factor Family AT5G45050 22.642 7.89e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0364 - - gmx:121172728 2234.14