Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0333 ATGGCTGGATGTTCTCAACAAAGGCTGATTGTTATGTTTTTATGTCTCATTGGGATAGTTTCAGCTACAGATTTAACTTCTTCAGCTGTGAGTTTAGCTGATTATGAGTTAAGCACCACTTTTTATCTTTTAAAGTGTCCCCTGGGCCTCTTTACCATTAATAACCTAGTAACCGCTGCTGTGCGGAAAGAGTCTCGCATGGGTGCATCCTTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGGATGTGATGCATCGGTTTTGTTAAAGAACACTGCAACTTTCACGGGCGAACAAGGTGCCTTCCCCAACGCTAATTCTCTAAGGGGTTTCGAAGTCATAGACAACATAAAAGCAAAATTAGAGATTTTGTGCCCTGGGGTTTTCTCTTGCGCTGACATCTTAGCCGTTGCTGCAAGGGATTCTGTTGTTGCTCTTGGTGGACTTGGGTGGCAAGTTCGCTTGGGGAGAAGGGACTCAACCACTGCAAGTTTAAGTGGAGCTAACTCAGATTTACCAGCTCCCTTTCTGGGTCTTAATGACCTTGTTGCTGCTTTCCAAAAGAAGGGTTTCACAGTAAATGAAATGGTTGCTTTATCAGGTGCTCACACAATAGGCAGCGCCAGGTGTTTAACCTTCCGATCAAGGGCTTACAACGATAGCGATATAGAACCCTCGTATGCAAATTTTTTGAGAAGCAATTGTCCCAAGAGTGGTGGTGATGACAACTTGTCTCCTATAGATATCGCCACTAAAGACATTTTTGACAATGCTTACTACCGGAATTTACTTTCCAAAAAGGGTCTTTTCCACTCTGACCAACAGCTCTATAGTGGCAGTTTCACGGACTCCAAAGTTAAAGATTATGCCACCTACCCATCACTCTTCAAATCAGATTTCGCTAAGGCCATGCTCAAGATGAGCAACCTTAGCCCACTTACAGGGGCACAGGGTCAGATCAGAAAAGTATGCAGCAGAGTGAATTAA 990 0.4384 MAGCSQQRLIVMFLCLIGIVSATDLTSSAVSLADYELSTTFYLLKCPLGLFTINNLVTAAVRKESRMGASLLRLHFHDCFVQGCDASVLLKNTATFTGEQGAFPNANSLRGFEVIDNIKAKLEILCPGVFSCADILAVAARDSVVALGGLGWQVRLGRRDSTTASLSGANSDLPAPFLGLNDLVAAFQKKGFTVNEMVALSGAHTIGSARCLTFRSRAYNDSDIEPSYANFLRSNCPKSGGDDNLSPIDIATKDIFDNAYYRNLLSKKGLFHSDQQLYSGSFTDSKVKDYATYPSLFKSDFAKAMLKMSNLSPLTGAQGQIRKVCSRVN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0333 329 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PANTHER PEROXIDASE 72-RELATED 29 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 CDD secretory_peroxidase 36 328 IPR033905 GO:0004601|GO:0042744
Gso3g0333 329 Gene3D Peroxidase, domain 2 174 308 - -
Gso3g0333 329 Gene3D - 40 326 - -
Gso3g0333 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Gso3g0333 329 SUPERFAMILY Heme-dependent peroxidases 36 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
Gso3g0333 329 PANTHER PEROXIDASE 29 328 - -
Gso3g0333 329 ProSiteProfiles Plant heme peroxidase family profile. 36 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0333 329 Pfam Peroxidase 55 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0333 Gso-Chr3 5099424 5102439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0333 32 329 Peroxidase AT5G05340 55.000 1.03e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0333 K00430 - gmx:100811432 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1703 18 49362116 49365313 Gso3g0333 3 5099424 5102439 PCT
Gso9g2294 9 47189907 47192897 Gso3g0333 3 5099424 5102439 PCT