Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0332 ATGTCTGCAACTTTTCCTGAATTCAAACTCAGGATTTGTTTGCTCTTATGTATAATTGGGACAGGTTTTGCTGATTCTGCTAATGATTTACGCCCAGACTTTTATAAGTCACAATGTCCCCAAGCACTTGAAGCCATTAAGGCAGAAATAACCTCTGCTGTGAGGAAAGAACCTGCAATGGGTTTAGTCTTCTTCCGTCTTCATTTCATTGATTGCGTTGTCCAAGGATGTGATGCATCAAACTTGTTAAAAGACACAGCAAATTTCACGGGCGAACAAAGTGCCATTCCTAGTCTTGATTCTAGAAATGGTACGGATATCATAGAGAAGATAAAAGCTAGAGTGGAGAAACTGTGCCCTGGTGTTGTCTCTTGCGCTGACATTGTAGCTTTTGCTGCGAGAGATTCCGTTGTTGCAGGATGGAAGTAG 429 0.4172 MSATFPEFKLRICLLLCIIGTGFADSANDLRPDFYKSQCPQALEAIKAEITSAVRKEPAMGLVFFRLHFIDCVVQGCDASNLLKDTANFTGEQSAIPSLDSRNGTDIIEKIKARVEKLCPGVVSCADIVAFAARDSVVAGWK* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0332 142 Gene3D - 30 141 - -
Gso3g0332 142 Pfam Peroxidase 47 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0332 142 PANTHER PEROXIDASE 13 139 - -
Gso3g0332 142 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0332 142 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0332 142 ProSiteProfiles Plant heme peroxidase family profile. 29 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0332 142 PANTHER PEROXIDASE 72-RELATED 13 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0332 142 SUPERFAMILY Heme-dependent peroxidases 29 138 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso3g0332 142 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0332 142 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0332 142 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0332 142 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0332 Gso-Chr3 5080581 5081393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0332 30 139 Peroxidase AT5G05340 54.545 1.60e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0332 K00430 - gmx:100796702 285.034