Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0331 ATGGCAGAAGCACTGGTAGGTGGTGCCTTTCTCTCTTCTTTCCTTAATGTGGTTTTCGACAGGCTGGCTACAAAGGAGTTTGTTGACTTGATCCGTGGAAAGAAGCTTAGCAAGAAGTTGCTTCAAAAGTTGGAGAACACTCTCAGAATGGTTGGAGCTGTGCTTGATGATGCCGAGAAGAAACAGATCACAAACACCAATGTCAAACACTGGCTCAATGATCTCAAAGATGCTGTCTATGAAGCCGATGACTTACTCGACCATGTTTTCACCAAAGCTGCCACCCAAAAGAAGGTAAGAAACTTTTTTTCTCGCTTTTCCGATAGGAAGATCGTTAGTAAGTTGGAGGACATAGTTGTCACACTTGAGTCTCATTTAAAACTCAAGGAGAAACTTGATTTGAAAGAGAGTGCTGTGGAGAACTTGTCATGGAAAGCTCTATCAACATCTGTGGAAGATGGATCTCATATATATGGTAGGGAGAAAGATAAGCAGGCCATAATCAAGTTGTTGTCGGAGGATAACAGTGACGGTAGTGAAGTGTCTGTGGTTCCTATTGTGGGCATGGGTGGGGTTGGAAAAACTACTTTGGCCCAATTGGTGTACAATGATGAGAATTTGAAAGAGATATTTGACTTTAAGGCATGGGTTTGTGTTTCTCAAGAATTTGATATTCTGAAGGTCACAAAAACTATAACAGAGGCGGTTACTGGAAAGCCTTGTATATTGAATGATCTGAATCTACTTCATCTTGAATTGATGGACAAGCTGAAAGATAAAAAATTCTTAATTGTCTTGGATGATGTTTGGACAGAGAATTATGTTAACTGGAGACTTCTTAAGAAACCATTTAACCGTGGGATTAGGAGAAGTAAGATTCTTCTGACAACCCGCAGTGAAAAAACAGCCTCTATAGTCCAAACTGTTCACACCTATCATCTAAACCAATTGTCGAATGAAGATTGTTGGTCAGTGTTTGCGAACCATGCATGTCTTTCCTCCGAGTCGAACGGGAACACAACAGCACTAGAAAAAATTGGAAAGGAGATTGTTAAAAAGTGCAACGGACTGCCTTTAGCAGCACAGTCGCTTGGAGGCATGTTAAGAAGAAAGCATGACATCGTGGATTGGAATAATATTCTCAATAGTGACATTTGGGAACTTTCTGAAAGTGAGTGTGAAGTTATTCCTGCACTGAGACTTAGTTATCATTATCTCCCTCCACATTTAAAACGGTGCTTTGTTTATTGTTCCTTGTATCCACAAGATTACCAATTTGAAAAAAATGAATTAATCTTGTTGTGGATGGCCGAAGACCTTTTGAAGAAATCAAGCACAGGTAGGACTTTAGAAGAGGTTGGTCATGAGTATTTTGATGATTTGGTTTCGAGATCATTTTTCCAACGTTCAAATTCAAGTAGTTGGTCTCATCGAAAATGGTTTGTGATGCATGACCTCATGCATGATCTAGCCACATCACTCGGTGGAGATTTTTATTTTAGATCAGAAGAACTTGGGAAAGAAACAAAGATCAAGACCAAGACTCGTCATTTGTCCTTTACGAAATTCAATTCTTCAGTCTTGGAAAACATTGATGTTGTTGGTAGAGCAAAATTTCTGAGAACTTTCTTGTCCATCATCAATTATGAAGCTGCTCCATTACACAATGAGGAGGCACAATGTATCATAGTGTCGAAGCTTATGTACTTGAGAGTTTTATCATTTCGTGACTTCCGAAGTTTGGATTCTATGCCTGATTCAATAGGTAAATTGATCCATCTGCGCTATTTAAATCTCTCTCGTTCAAGTATAGAAACACTGCCAGAGTCAGTGTGTAATTTGTACAATCTGCAAACTTTGAAGTTGTGTTTTTGCATAAAACTGACTAAGTTGCCTAGTGACATGCGCAATCTTGTTAACTTGCGTCATCTTGGTATTTCTTATACTTCTATAGAAGAGATGCCGAGAGGAATTTGTAAATTAAATCATCTACAACATCTGGATTTCTTTGTTGTGGGCAAGCACAAAGAGAATGGGATCAAAGAATTGGGAGGACTTTCAAATCTTCGTGGTCAACTTGTAATTAGGAACTTGGAGAATGTTTCCCAAAGTGATGAAGCGTTGGCGGCAAGGATGATGGATAAAAAACACATTAATAGTTTACGGTTGGCATGGTCTGGATGTAACAACAACAGTACCAACTTCCAACTTGAAATAGACGTGCTTTTCAAGTTACAGCCTCACTTTAACATTGAATCGTTGGAAATAATAGGCTATAAAGGAACCAGATTTCCAGATTGGATGGGAAATTCTTCCTACTGCAATATGACATGTCTATACTTGTATGATTGTGACAACTGTAGTATGCTTCCTTCACTTGGACAACTACCTTCTCTCAAGGTCCTTGAAATTTCACGATTGAATAGGCTGAAGACTATTGATGCACGTTTTTACAAGAATGAAGATTGTCGTTGTGGGACGCCCTTTCCCTCCCTTGAATCTCTGTCCATTCGTGACATGCCTTGTTGGGAGTTGTGGAGTTCCTTTGATTCAGAAGCTTTTCCTGTGCTTAAAAGTCTTGACATAAGTGTCTGCCCCAAACTAGAGGGAAGTTTGCCGAATCACCTTCCTGCTCTGGAAACACTTCGTATAATTAAATGCGAGCTGCTTGTCTCTTCTCTCCCAACGGCTCCCGCCATTCAAAGTTTGGAGATACGTAAAAGCAATAAAGTAGCACTGCTTGCGTTTCCTCTCTTGGTAGAAACTATAGAAGTAGAAGGAAGCCCAATGGTGGAGTCCATGATAGAGGCCATCACTAACATCCAACCAACTTGTCTCCGGTCTTTAGAATTAAGGGATTGCTCGTCAGCCGTGTCATTTCCGGGTGGTCGTTTACCTGAATCTCTGAAGACTCTGCGTATCTGGGATCTTAAAAAACTGGAATTCCCGACGCAACACAAACATGAGTTACTGGAAACACTGACAATAGAAAGCAGTTGTGATTCACTCACATCTCTTCCATTGATTACCTTTCCAAATCTCAGAGATCTTGCAATCAGAAACTGTGAAAATATGGAATGTCTTTTGGTTTCAGGGGCAGAGTCATTTAAGAGTCTGTGTTCTTTGAGAATTTATCAATGCCCCAACTTTGTATCATTCTGGAGAGAAGGATTGCCTGCGCCCAACTTGATTACTTTCGAAGTTTGTGGCTCTGACAAGTTGAAGTCGTTGCCTGATGAGATGAGTACTCTTCTCCCAAAGTTAGAACATCTTTACATATCCAACTGCCCAGAAATTGAGTCGTTTCCAGAAGGGGGTATGCCACCTAACCTGAGAACAGTTTCGATTGTCAATTGTGAGAAACTACTGAGCGGCCTAGCATGGCCATCCATGGGCATGCTTACTGATCTCACTGTTTCGGGTCGATGTGATGGCATCAAGTCCTTCCCTAAGGAGGGTTTGCTGCCTCCCTCCCTTACGTCTCTGTATCTATTTGACTTGTCAAATCTGGAGTTGTTGGACTGCACGGGGCTTCTCCATCTCACATCCCTGCAAATATTATACATAGGCAATTGTCCTTTGCTGGAGAATATGGCTGGAGAAAGGCTTCCTGTCTCTCTAATAAAATTAACCATAAAGAGATGTCCTTTGCTGGAAAAACGATGCTGCATGAAGCACCCTCAAATTTGGCCTAAAATTTCCCACATCCCTGGCATTTGGGTTGACTATAGATGGATTTAG 3741 0.4076 MAEALVGGAFLSSFLNVVFDRLATKEFVDLIRGKKLSKKLLQKLENTLRMVGAVLDDAEKKQITNTNVKHWLNDLKDAVYEADDLLDHVFTKAATQKKVRNFFSRFSDRKIVSKLEDIVVTLESHLKLKEKLDLKESAVENLSWKALSTSVEDGSHIYGREKDKQAIIKLLSEDNSDGSEVSVVPIVGMGGVGKTTLAQLVYNDENLKEIFDFKAWVCVSQEFDILKVTKTITEAVTGKPCILNDLNLLHLELMDKLKDKKFLIVLDDVWTENYVNWRLLKKPFNRGIRRSKILLTTRSEKTASIVQTVHTYHLNQLSNEDCWSVFANHACLSSESNGNTTALEKIGKEIVKKCNGLPLAAQSLGGMLRRKHDIVDWNNILNSDIWELSESECEVIPALRLSYHYLPPHLKRCFVYCSLYPQDYQFEKNELILLWMAEDLLKKSSTGRTLEEVGHEYFDDLVSRSFFQRSNSSSWSHRKWFVMHDLMHDLATSLGGDFYFRSEELGKETKIKTKTRHLSFTKFNSSVLENIDVVGRAKFLRTFLSIINYEAAPLHNEEAQCIIVSKLMYLRVLSFRDFRSLDSMPDSIGKLIHLRYLNLSRSSIETLPESVCNLYNLQTLKLCFCIKLTKLPSDMRNLVNLRHLGISYTSIEEMPRGICKLNHLQHLDFFVVGKHKENGIKELGGLSNLRGQLVIRNLENVSQSDEALAARMMDKKHINSLRLAWSGCNNNSTNFQLEIDVLFKLQPHFNIESLEIIGYKGTRFPDWMGNSSYCNMTCLYLYDCDNCSMLPSLGQLPSLKVLEISRLNRLKTIDARFYKNEDCRCGTPFPSLESLSIRDMPCWELWSSFDSEAFPVLKSLDISVCPKLEGSLPNHLPALETLRIIKCELLVSSLPTAPAIQSLEIRKSNKVALLAFPLLVETIEVEGSPMVESMIEAITNIQPTCLRSLELRDCSSAVSFPGGRLPESLKTLRIWDLKKLEFPTQHKHELLETLTIESSCDSLTSLPLITFPNLRDLAIRNCENMECLLVSGAESFKSLCSLRIYQCPNFVSFWREGLPAPNLITFEVCGSDKLKSLPDEMSTLLPKLEHLYISNCPEIESFPEGGMPPNLRTVSIVNCEKLLSGLAWPSMGMLTDLTVSGRCDGIKSFPKEGLLPPSLTSLYLFDLSNLELLDCTGLLHLTSLQILYIGNCPLLENMAGERLPVSLIKLTIKRCPLLEKRCCMKHPQIWPKISHIPGIWVDYRWI* 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0331 1246 Gene3D Ribonuclease Inhibitor 895 1056 IPR032675 -
Gso3g0331 1246 Gene3D - 18 118 - -
Gso3g0331 1246 PANTHER OS05G0414200 PROTEIN 946 1197 - -
Gso3g0331 1246 PANTHER OS05G0414200 PROTEIN 15 876 - -
Gso3g0331 1246 SUPERFAMILY L domain-like 935 1233 - -
Gso3g0331 1246 Gene3D Ribonuclease Inhibitor 681 894 IPR032675 -
Gso3g0331 1246 Gene3D Ribonuclease Inhibitor 1057 1227 IPR032675 -
Gso3g0331 1246 Coils Coil 41 61 - -
Gso3g0331 1246 PRINTS Disease resistance protein signature 183 198 - -
Gso3g0331 1246 PRINTS Disease resistance protein signature 256 270 - -
Gso3g0331 1246 PRINTS Disease resistance protein signature 354 368 - -
Gso3g0331 1246 PRINTS Disease resistance protein signature 794 810 - -
Gso3g0331 1246 SUPERFAMILY L domain-like 482 891 - -
Gso3g0331 1246 SMART LRR_typ_2 591 614 IPR003591 -
Gso3g0331 1246 SMART LRR_typ_2 638 661 IPR003591 -
Gso3g0331 1246 SMART LRR_typ_2 796 820 IPR003591 -
Gso3g0331 1246 Gene3D Ribonuclease Inhibitor 497 678 IPR032675 -
Gso3g0331 1246 Gene3D - 402 493 IPR036388 -
Gso3g0331 1246 Pfam Rx N-terminal domain 10 98 IPR041118 -
Gso3g0331 1246 Pfam NB-ARC domain 160 383 IPR002182 GO:0043531
Gso3g0331 1246 Gene3D - 137 312 IPR027417 -
Gso3g0331 1246 PANTHER DISEASE RESISTANCE PROTEIN RP 15 876 IPR044974 GO:0006952
Gso3g0331 1246 PANTHER DISEASE RESISTANCE PROTEIN RP 946 1197 IPR044974 GO:0006952
Gso3g0331 1246 Gene3D - 316 401 IPR042197 -
Gso3g0331 1246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 417 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0331 Gso-Chr3 5033698 5038225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0331 581 669 WRKY Transcription Factor Family AT4G12020 37.778 1.99e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0331 - - gmx:100775612 2201.79