Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0329 ATGGCTTCCCGTAAGTATTTCTCTATTGTTATCTATGCTTTTATACTTGGAGCTTTTGCAAATACGGCATTCTCATCATTGTCTCGTGATTACTATGACTACTCGTGCCCTAATGCTTTGAGCACCATTAGAAGTGTTGTGGAGGCTGCGGTGCAGAAAGAGCGCCGTATGGCCGCATCCTTGCTACGCACACACTTCCGTGATTGTTTTGTTAATGGTTGTGATGGTTCAATTCTACTAGACCCTTCACCAACAATTGACAGCGAAAAGAGTGCAGTTCCTGATTTTCAATCCGACAAAGCATTTAAATTGGTGGATGAGATCAAAGAGGCTGTGGACCAAGCATGTGGAAAACCAGTTGTTTCTTGCGCTGACATATTGACTGTTGCCGCTCGTGACTCTGTCGTTGCGCTAGGGGGACCAACATGGGAGGTGAGACTGGGGAGAAGAGACTCCACCATAGCAAGCCGTGATGCAGCAAATGCAAACATTCCATCACCATTTTTCAGCCTTTCTGAGCTCATAAGCAACTTCAAGAGCCATGGACTAAACGAGAAGGACCTTGTTGCTCTTTCTGGAGGCCACACAATTGGAAATGCACGTTGTGCAACCTTTAGGGACCACATCTACAATGACTCTAATATCAATCCACATTTTGCAAAAGAGCTCAAATACATTTGTCCTAGAGAAGGAGGTGACTCCAACATTGCTCCTTTGGACCGCACAGCAGCGCAATTTGATTCAGCCTATTTTCGTGACTTGGTTCACAAGAAAGGGCTTCTTCGCTCCGATCAGGAACTGTTCAATGGTGGTTCTACTGATGCATTGGTAAAAAAATATAGCCAAAATACCAAGGTTTTCCGCCAGGACTTCGCAAAATCTATGATTAAGATGGGAAACATAAAGCCTCTTACCGGGAATAGAGGTGAAATTCGTTTGAACTGCAGGAGAGTGAACTAA 960 0.4448 MASRKYFSIVIYAFILGAFANTAFSSLSRDYYDYSCPNALSTIRSVVEAAVQKERRMAASLLRTHFRDCFVNGCDGSILLDPSPTIDSEKSAVPDFQSDKAFKLVDEIKEAVDQACGKPVVSCADILTVAARDSVVALGGPTWEVRLGRRDSTIASRDAANANIPSPFFSLSELISNFKSHGLNEKDLVALSGGHTIGNARCATFRDHIYNDSNINPHFAKELKYICPREGGDSNIAPLDRTAAQFDSAYFRDLVHKKGLLRSDQELFNGGSTDALVKKYSQNTKVFRQDFAKSMIKMGNIKPLTGNRGEIRLNCRRVN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0329 319 CDD secretory_peroxidase 27 318 IPR033905 GO:0004601|GO:0042744
Gso3g0329 319 Gene3D Peroxidase, domain 2 165 298 - -
Gso3g0329 319 PANTHER PEROXIDASE 23 318 - -
Gso3g0329 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gso3g0329 319 Pfam Peroxidase 44 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 PANTHER PEROXIDASE 72-RELATED 23 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 ProSiteProfiles Plant heme peroxidase family profile. 26 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 SUPERFAMILY Heme-dependent peroxidases 27 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso3g0329 319 Gene3D - 30 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0329 Gso-Chr3 4975793 4978204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0329 1 319 Peroxidase AT5G05340 53.846 7.44e-121 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0329 K00430 - gmx:100803619 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1704 18 49376655 49379468 Gso3g0329 3 4975793 4978204 PCT
Gso9g2293 9 47181840 47184434 Gso3g0329 3 4975793 4978204 PCT
Gso3g0329 3 4975793 4978204 Gso18g1704 18 49376655 49379468 PCT
Gso3g0329 3 4975793 4978204 Gso9g2293 9 47181840 47184434 PCT