Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0327 ATGCATAGTAATAGAATGGCATCACGTGGGTATTTCTTTGTTGTTCTCCATGCCTTAGTGTTTGCATCTATTGCAACCTCAGCTTTCTCACAATTGTCACCAAATTACTATGATTATTCGTGCCCCAGAGCTTTGAGCACCATCAAAAGTGTTGTGGAGGCTTCTGTGCAGAAAGAGCGTCGTATGGGTGCTTCATTGCTACGCTTGCACTTCCATGATTGTTTTGTTAATGGTTGTGATGGTTCAATTCTTCTAGACTCCACATCCTCCATTGACAGCGAAAAGAATGCAGCTGCTAATTTGCAATCTGCTAGAGGATTTGAAGTGGTGGATGACATAAAGAAAGCTGTGGACGAAGCATGTGGAAAAGCAGTTGTTTCTTGCGCAGACATATTGGCTGTTGCAGCTCGTGATTCAGTCGTTGCGTTAGGTGGGCCATCATGGAAGGTGAGACTTGGCAGAAGAGACTCTACTACTGCAAGCCGTGAAGCAGCAGATGCAAGCATTCCAGCACCATTTTTCAGCCTATCTGAACTCATCACCAACTTCAAGAACCATGGTCTTGATGAGAAGGACCTTGTTGTTCTTTCTGGAGGCCACAGCATTGGATTTGCACGTTGTGTTACATTTAAGGACCATATCTACAATGACTCCAACATCGATCCCAACTTTGCACAACAACTTAGATACATTTGCCCTACAAACGGTGGTGATTCCAACCTTTCTCCTTTGGACTCAACAGCGGCTAAATTTGACATAAACTATTACTCTAATTTGGTTCAAAAGAAAGGGCTTCTTCACTCTGATCAAGAACTCTTCAATGGTGGTTCTACTGATGAACTGGTCAAAGAATACAGCGACGATACCGAAGATTTCTACGAGGACTTTGCGAACTCGATGATTAAGATGGGAAATATTCAGCCCCTCACCGGGAATCAAGGTGAAATTCGGGTTAACTGCAGGAATGTGAACTAA 975 0.4338 MHSNRMASRGYFFVVLHALVFASIATSAFSQLSPNYYDYSCPRALSTIKSVVEASVQKERRMGASLLRLHFHDCFVNGCDGSILLDSTSSIDSEKNAAANLQSARGFEVVDDIKKAVDEACGKAVVSCADILAVAARDSVVALGGPSWKVRLGRRDSTTASREAADASIPAPFFSLSELITNFKNHGLDEKDLVVLSGGHSIGFARCVTFKDHIYNDSNIDPNFAQQLRYICPTNGGDSNLSPLDSTAAKFDINYYSNLVQKKGLLHSDQELFNGGSTDELVKEYSDDTEDFYEDFANSMIKMGNIQPLTGNQGEIRVNCRNVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0327 324 ProSiteProfiles Plant heme peroxidase family profile. 31 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Gso3g0327 324 Pfam Peroxidase 49 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 CDD secretory_peroxidase 31 321 IPR033905 GO:0004601|GO:0042744
Gso3g0327 324 SUPERFAMILY Heme-dependent peroxidases 31 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso3g0327 324 Gene3D - 35 321 - -
Gso3g0327 324 PANTHER PEROXIDASE 28 323 - -
Gso3g0327 324 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Gso3g0327 324 Gene3D Peroxidase, domain 2 170 303 - -
Gso3g0327 324 PANTHER PEROXIDASE 72-RELATED 28 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0327 Gso-Chr3 4955132 4957524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0327 30 324 Peroxidase AT5G05340 58.725 1.07e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0327 K00430 - gmx:100799894 636.336