Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0322 ATGAGCAAGGTGTTCAATGCTTTTGGTGCAATTTCCGTCATCATTGTTTGCAACACCAGTGGCTTGCTCCCCGAGATACGGGAATCTATAGGGAATGTTGTCTTTTTCAGTGTATACAAATATGTGTGTTATTACATGCATTCAAATATCAAAGCTGCTTCATCCAATTACACCAACCTAGTTGATATTGGAATTTGGATCGTTAGTGGTGGCCTTGGTGGTGTGGCTTTTTGGTTGACAGTTTTGCCTCTTGATGTGGCAAAGACTTTAATTCAGACAAACCCTGATAAAAATTGTCCAAGAAATCCTTTTCGGGTCTTGAGTTCAATCTATCAAAGGGCTGGATTCAACGGATGCTATACAGGTTTGGGTCCTACTGTAAGTCGAGCATTTCCTGCTAATGCTGCAACAATAGTCGCATGGGAGCTAGCATTGAAAATGCTAGGCATTAAGCATGACTGA 462 0.4134 MSKVFNAFGAISVIIVCNTSGLLPEIRESIGNVVFFSVYKYVCYYMHSNIKAASSNYTNLVDIGIWIVSGGLGGVAFWLTVLPLDVAKTLIQTNPDKNCPRNPFRVLSSIYQRAGFNGCYTGLGPTVSRAFPANAATIVAWELALKMLGIKHD* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0322 153 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 21 152 - -
Gso3g0322 153 PANTHER - 21 152 - -
Gso3g0322 153 SUPERFAMILY Mitochondrial carrier 26 142 IPR023395 -
Gso3g0322 153 Pfam Mitochondrial carrier protein 67 148 IPR018108 -
Gso3g0322 153 ProSiteProfiles Solute carrier (Solcar) repeat profile. 61 147 IPR018108 -
Gso3g0322 153 Gene3D Mitochondrial carrier domain 20 152 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0322 Gso-Chr3 4883025 4894035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0322 26 148 Antiporters AT1G79900 30.469 2.86e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0322 K15109 - gmx:100815087 248.44