Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0320 ATGGCATCGCGTGGGTATTTCTTTGTTCTTCTCCATGCTTTTGTGTTTGCGACTCTTGCAACCTCAGCTTTCTCAAAATTGTCACCTAATTACTATGATTTCTCGTGCCCTAAAGCTTTGAGCACCATCAAAAGTGTCGTTGAGGCCACGGTGAAGAAAGAGCGTCGTATGGGTGCATCCTTGCTACGCTTGCACTTCCATGATTGTTTTGTTAACGGTTGTGATGGTTCAGTTCTTCTAGACTCCACATCCTCCATTGACAGCGAAAAGAAAGCAACTCCTAATTTCAAATCTGCAAGAGGATTTGAAGTGATTGATGATATCAAGAAGGCTGTGGACGAAGCATGTGGAAAACCAGTTGTTTCTTGTGCTGACATAGTGGCTGTTGCCGCTCGTGACTCCGTGGTTGCGTTAGGTGGACCAACATGGAAAGTTGAACTAGGAAGAAGAGATTCCACTACAGCAAGCCGTAAAGCAGCAAATGCAAACATTCCAGCACCAACTTTTAACCTATCTCAACTAATCACCAACTTCAAGAACCATGGTCTTGATGAAAAGGACCTTGTTGTTCTTTCTGGAGGCCACTCCATTGGATTTGCACGTTGTGTTTTTTTCAGGAACCATATCTACAATGACTCCAACAACATCGATCCCAAATTTGCAAAACGTCTCAAACACATTTGCCCTAAAAAAGGTGGTGACTCCAACCTTGCTCCTTTGGACAAAACCGGACCGAATCACTTTGAAATTGGCTATTACTCTAATTTGGTTCAAAAGAAAGGGCTTCTTCATTCTGATCAAGAACTTTTCAATGGTGGCTATACTGATGCACTGGTTAGACAGTACAGCTACGGTCACGTAGCTTTCTTCGAGGATTTCGCGAATTCGATGATTAAGATGGGAAATACTCGGCCCCTTACTGGGAATCAAGGTGAAATCCGTGTTAACTGCAGGAAAGTGAACTAG 966 0.4327 MASRGYFFVLLHAFVFATLATSAFSKLSPNYYDFSCPKALSTIKSVVEATVKKERRMGASLLRLHFHDCFVNGCDGSVLLDSTSSIDSEKKATPNFKSARGFEVIDDIKKAVDEACGKPVVSCADIVAVAARDSVVALGGPTWKVELGRRDSTTASRKAANANIPAPTFNLSQLITNFKNHGLDEKDLVVLSGGHSIGFARCVFFRNHIYNDSNNIDPKFAKRLKHICPKKGGDSNLAPLDKTGPNHFEIGYYSNLVQKKGLLHSDQELFNGGYTDALVRQYSYGHVAFFEDFANSMIKMGNTRPLTGNQGEIRVNCRKVN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0320 321 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gso3g0320 321 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Gso3g0320 321 Gene3D Peroxidase, domain 2 165 300 - -
Gso3g0320 321 PANTHER PEROXIDASE 72-RELATED 23 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 Gene3D - 30 318 - -
Gso3g0320 321 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601|GO:0042744
Gso3g0320 321 PANTHER PEROXIDASE 23 320 - -
Gso3g0320 321 ProSiteProfiles Plant heme peroxidase family profile. 26 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 SUPERFAMILY Heme-dependent peroxidases 27 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0320 321 Pfam Peroxidase 44 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0320 Gso-Chr3 4860016 4861954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0320 25 321 Peroxidase AT5G05340 57.525 1.92e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0320 K00430 - gmx:100785609 652.129