Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0301 ATGGCAGCAGCACTGGTCGGTGGTGCCTTTCTCTCTGCTTTTCTTGATGTGGTTTTCGACAGGCTGGCTTCACCTGAGTTTGTTGACTTGATCCTTGGAAAGAAGCTTAGCAAGAAGTTGCTTCAAAAGTTGGAGACCACTCTCAGAGTGGTTGGAGCTGTGCTTGATGATGCCGAGAAGAAACAGATCACAAACACCAATGTCAAACACTGGCTCAATGATCTCAAAGATGCTGTCTATGAAGCCGATGACTTACTCGACCATGTTTTCACCAAAGCTGCCACCCAAAACAAGGTAAGAGACTTGTTTTCTCGTTTTTCCGATAGGAAGATCGTTAGTAAGTTGGAGGACATAGTTGTCACACTTGAGTCTCATTTAAAACTCAAGGAGAGTCTTGATTTGAAAGAGAGTGCAGTGGAGAACTTGTCATGGAAAGCTCCATCAACATCTCTGGAAGATGGATCTCATATATATGGTAGGGAGAAAGATAAGGAGGCCATAATCAAGTTGTTGTCGGAGGATAACAGTGACGGTAGTGAAGTGTCTGTGGTTCCTATTGTGGGCATGGGTGGGGTTGGAAAAACTACTTTGGCCCAATTGGTGTACAACGATGAGAATTTGAAAGAGAAATTTGATTTTGATTTTAAGGCATGGGTTTGTGTTTCTCAAGAATTTGATGTTCTGAAGGTCACAAAAACTATAATAGAGGCGGTTACTGGACAGCCTTGTAAATTGAATGATCTGAATCTACTTCATCTTGAATTGATGGACAAGCTGAAAGATAAAAAATTCTTAATTGTCTTGGATGATGTTTGGACAGAGGATTATGTTGATTGGCGTCTTCTTAAGAAACCATTTAACCGTGGGATTATTAGGAGAAGTAAAATTCTTCTAACAACCCGCAGTGAAAAAACAGCATCTGTAGTCCAAACTGTTCACACCTATCATCTAAACCAATTGTCGAATGAAGATTGTTGGTCAGTGTTTGCGAACCATGCGTGTCTTTACTCCGAATCGAACGAGAACACCACAACACTAGAAAAAATTGGAAAGGAGATTATTAAAAAGTGCAACGGACTGCCTTTAGCAGCAGAGTCGCTTGGAGGCATGTTGAGAAGAAAGCATGACATTGGGGATTGGAATAATATTCTCAATAGTGACATTTGGGAACTTTCTGAAAGTGAGTGTAAAGTTATTCCAGCACTGAGACTTAGTTATCATTATCTCCCTCCACATTTAAAACGATGCTTTGTTTATTGTTCGTTGTATCCACAAGATTACGAATTTGAAAAAAATGAATTAATCTTGTTGTGGATGGCTGAAGATCTTTTGAAGAAACCAAGGAAAGGTAGGACTTTAGAAGAGGTTGGTCATGAGTATTTTGATGATTTGGTTTCGAGATCATTTTTCCAACGTTCAAACACAAGTAGAAGTAGTTGGCCTTATGGCAAATGTTTTGTGATGCATGACCTCATGCATGATCTAGCCACATCACTCGGTGGAGATTTTTACTTTAGATCAGAAGAACTTGGGAAAGAAACAAAGATCAATACTAAGACTCGTCATTTGTCATTTGCCAAATTCAATTCTTCAGTCTTGGACAACTTTGATGTTGTTGGTAGAGCAAAATTTCTGAGAACTTTCTTGTCTATTATCAATTTTGAGGCTGCTCCATTCAACAACGAGGAGGCACAATGTATCATAGTGTCGAAGCTTATGTACTTGAGAGTTTTATCATTTCATGACTTCCAAAGTCTGGATTCTTTGCCTGACTCAATAGGTAAATTGATCCATCTGCGCTATTTAGATCTCTCTCGTTCAAGTGTAGAAACACTGCCAAAGTCAGTGTGTAATTTATACAATCTGCAAACTTTGAAGTTGTATGGTTGCATCAAACTGACTAAGTTGCCTAGTGACATGTGCAATCTTGTTAACTTGCGTCATCTTGGTATTGCTGATGCTCCTATAAAAGAGATGCCGAGAGGAATGAGTAAATTAAATCATTTACAACATCTGGATTTCTTTGCTGTGGGCAAGCACGAAGAGAATGGAATCAAAGAATTGGGAGCACTTTCAAATCTTCGTGGTCAACTTGAACTTAGGAACTTGGAGAATGTTTCCCAAAGTGATGAAGCGTTGGAGGCAAGGATGATGGATAAAAAACACATTAATAGTTTACAGTTGGAATGGTCTGGATGTAACAACAACAGTACCAACTTCCAACTTGAAATAGATGTGCTTTGCAAGTTACAGCCTCACTTTAACATTGAATCGTTGGAAATAAAAGGTTATGAAGGAACCAGATTTCCAGATTGGATGGGAAATTCTTCCTACTGCAATATGATTAGTCTAAAATTGCGTGATTGTGACAACTGTAGTATGCTTCCTTCACTTGGACAACTACCTTCTCTCAAGGTCCTTAAGATTGCACGATTGAATAGGCTGAAGACTATTGATGCAGGTTTTTACAAGAACGAAGATTGTCGTTCTGGGACGCCCTTTCCCTCCCTTGAATCTCTGGCCATTCATCAAATGCCTTGTTGGGAGGTGTGGAGTTCCTTCGATTCAGAAGCTTTTCCTGTGCTTGAAATTCTTGAAATACGTGACTGCCCCAAACTAGAGGGAAGTTTGCCGAATCACCTTCCTGCTCTGAAAACACTTACAATTAGAAATTGTGAGCTGCTTGGCTCTTCTCTCCCAACGGCTCCCGCCATTCAAAGTTTGGGGATATGTGAAAGCAATAAAGTAGCACTGCATGCGTTTCCTCTCTTGGTAGAAACTATAGAAGTAGAAGGAAGCCCAATGGTGGAGTCCATGATAGAGGCCATCACTAACATCCAACCAACTTGTCTCTGGTCTTTAACATTAAGGGATTGCTCGTCAGCCGTGTCATTTCCGGGTGGTCGTTTACCTGAATCACTGAAGACTCTGCGTATCAAGGATCTTAAAAAACTGGAATTCCCGACGCAACACAAACATGAGTTACTGGAAAAACTGTCAATAGAAAGCAGTTGTGATTCACTCACATCTCTTCCATTGGTTACCTTTCCAAATCTCAGAGATCTCACAATCGAAAAGTGTGAAAATATGGAATATCTTTTGGTTTCAGGGGCAGAGTCATTTAAGAGTCTGTGTTATTTGTTAATTTACAAATGCCCCAACTTTGTATCATTCTGGAGAGAAGGATTGCCTGCGCCCAACTTGATTACTTTCCAAGTTTGGGACTCTGACAAGTTGAAGTCGTTGCCTGATGAGATGAGTACTCTTCTCCCAAAGTTAGAACGTCTCCTCATATCCAACTGCCCAGAAATTGAGTCGTTTCCAAAACGGGGTATGCCACCTAACCTGAGAATAGTTTGGATTTTCAATTGTGAGAAACTACTGAGCGGCCTAGCATGGCCATCCATGGGCATGCTTACTCATCTCTATGTTGGGGGTCGATGTGATGGCATCAAGTCCTTCCCTAAGGAGGGTTTGCTGCCTCCCTCCCTTACGTCTCTGTATCTAAGTGGATTCTCAAATCTGGAGATGTTGGACTGCACGGGGCTTCTCCATCTCACATCCCTGCAAGAATTAACCATAGAGAGTTGTCCTTTGCTGGAAAATATGGTGGGAGAAAGGCTTCCTGTCTCTCTAATAAAATTAACAATAAAGAGATGTCCTTTGCTGGAAAAACGATACCGCATGAAGCACCCTCAAATTTGGCCTAAAATTTCCCACATCCCTGGCATTCAGGTTGATGATAGATGGATTTAG 3756 0.4084 MAAALVGGAFLSAFLDVVFDRLASPEFVDLILGKKLSKKLLQKLETTLRVVGAVLDDAEKKQITNTNVKHWLNDLKDAVYEADDLLDHVFTKAATQNKVRDLFSRFSDRKIVSKLEDIVVTLESHLKLKESLDLKESAVENLSWKAPSTSLEDGSHIYGREKDKEAIIKLLSEDNSDGSEVSVVPIVGMGGVGKTTLAQLVYNDENLKEKFDFDFKAWVCVSQEFDVLKVTKTIIEAVTGQPCKLNDLNLLHLELMDKLKDKKFLIVLDDVWTEDYVDWRLLKKPFNRGIIRRSKILLTTRSEKTASVVQTVHTYHLNQLSNEDCWSVFANHACLYSESNENTTTLEKIGKEIIKKCNGLPLAAESLGGMLRRKHDIGDWNNILNSDIWELSESECKVIPALRLSYHYLPPHLKRCFVYCSLYPQDYEFEKNELILLWMAEDLLKKPRKGRTLEEVGHEYFDDLVSRSFFQRSNTSRSSWPYGKCFVMHDLMHDLATSLGGDFYFRSEELGKETKINTKTRHLSFAKFNSSVLDNFDVVGRAKFLRTFLSIINFEAAPFNNEEAQCIIVSKLMYLRVLSFHDFQSLDSLPDSIGKLIHLRYLDLSRSSVETLPKSVCNLYNLQTLKLYGCIKLTKLPSDMCNLVNLRHLGIADAPIKEMPRGMSKLNHLQHLDFFAVGKHEENGIKELGALSNLRGQLELRNLENVSQSDEALEARMMDKKHINSLQLEWSGCNNNSTNFQLEIDVLCKLQPHFNIESLEIKGYEGTRFPDWMGNSSYCNMISLKLRDCDNCSMLPSLGQLPSLKVLKIARLNRLKTIDAGFYKNEDCRSGTPFPSLESLAIHQMPCWEVWSSFDSEAFPVLEILEIRDCPKLEGSLPNHLPALKTLTIRNCELLGSSLPTAPAIQSLGICESNKVALHAFPLLVETIEVEGSPMVESMIEAITNIQPTCLWSLTLRDCSSAVSFPGGRLPESLKTLRIKDLKKLEFPTQHKHELLEKLSIESSCDSLTSLPLVTFPNLRDLTIEKCENMEYLLVSGAESFKSLCYLLIYKCPNFVSFWREGLPAPNLITFQVWDSDKLKSLPDEMSTLLPKLERLLISNCPEIESFPKRGMPPNLRIVWIFNCEKLLSGLAWPSMGMLTHLYVGGRCDGIKSFPKEGLLPPSLTSLYLSGFSNLEMLDCTGLLHLTSLQELTIESCPLLENMVGERLPVSLIKLTIKRCPLLEKRYRMKHPQIWPKISHIPGIQVDDRWI* 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0301 1251 Coils Coil 1251 1251 - -
Gso3g0301 1251 Gene3D - 140 315 IPR027417 -
Gso3g0301 1251 Gene3D - 319 404 IPR042197 -
Gso3g0301 1251 Coils Coil 41 61 - -
Gso3g0301 1251 Gene3D - 405 498 IPR036388 -
Gso3g0301 1251 Gene3D Ribonuclease Inhibitor 547 950 IPR032675 -
Gso3g0301 1251 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 22 896 - -
Gso3g0301 1251 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 1069 1216 - -
Gso3g0301 1251 SUPERFAMILY L domain-like 487 898 - -
Gso3g0301 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 420 IPR027417 -
Gso3g0301 1251 Pfam Rx N-terminal domain 10 98 IPR041118 -
Gso3g0301 1251 Pfam NB-ARC domain 160 386 IPR002182 GO:0043531
Gso3g0301 1251 Gene3D - 19 119 - -
Gso3g0301 1251 PRINTS Disease resistance protein signature 183 198 - -
Gso3g0301 1251 PRINTS Disease resistance protein signature 258 272 - -
Gso3g0301 1251 PRINTS Disease resistance protein signature 357 371 - -
Gso3g0301 1251 PRINTS Disease resistance protein signature 879 895 - -
Gso3g0301 1251 SUPERFAMILY L domain-like 940 1231 - -
Gso3g0301 1251 Gene3D Ribonuclease Inhibitor 1112 1232 IPR032675 -
Gso3g0301 1251 Gene3D Ribonuclease Inhibitor 973 1111 IPR032675 -
Gso3g0301 1251 PANTHER DISEASE RESISTANCE PROTEIN RP 1069 1216 IPR044974 GO:0006952
Gso3g0301 1251 PANTHER DISEASE RESISTANCE PROTEIN RP 22 896 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0301 Gso-Chr3 4508917 4513444 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0301 586 674 WRKY Transcription Factor Family AT4G12020 37.778 1.98e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0301 - - gmx:100784015 2245.31