Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0296 ATGGCAGCAGCAGTGGTAGGTGGTGCCTTTCTCTCTGCTTTCCTTGATGTGCTTTTCGACAGGCTGGCTTCACCTGAGTTTGTTGACTTGATCCTTGGAAAGAAGCTTAGCAAGAAGTTGCTTCAAAAGTTGGAGACCACTCTCAGAGTGGTTGGAGCTGTGCTTGATGATGCCGAGAAGAAACAGACCACAAACACCAATGTCAAACACTGGCTCAATGATCTCAAAGATGCTGTCTATGAAGCTGATGACTTACTCGACCATGTTTTCACCAAAGCTGCCACCCAAAACAAGGTAAGAAACTTTTTTTCTCGCTTTTCTGATAGGAAGATCGGTAGTAAGTTGGAGGACATAGTTGTCACACTTGAGTCTCATTTAAAACTCAAGGAGAGTCTTGATTTGAAAGAGAGTGCAGTGGAGAACGTGTCATGGAAAGCTCCATCAACATCTCTGGAAGATGGATCTCATATATATGGTAGGGAGAAAGATAAGGAGGCCATAATCAAGTTGTTGTCGGAGGATAACAGTGACGGTAGTGAAGTGTCTGTGGTTCCTATTGTGGGCATGGGTGGGGTTGGAAAAACTACTTTGGCCCAATTGGTGTACAATGATGAGAATTTGGAAGAGATATTTGACTTTAAGGCATGGGTTTGTGTTTCTCAAGAACTTGATATTCTGAAGGTCACAAAAACTATAACAGAGGCGGTTACTGGAAAGCCTTGTAAATTGAATGATCTGAATCTACTTCATCTTGAATTGATGGACAAGCTGAAAGATAAAGAATTCTTAATTGTCTTGGATGATGTTTGGACAGAGAATTATGTTAACTGGAGACTTCTTAAGAAACCATTTAACCGTGGGATTAGGAGAAGTAAGATTCTTCTAACAACCCGCAGTGAAAAAACAGCCTCTATAGTCCAAACTGTTCACATCTATCATCTAAACCAATTGTCGAATGAAGATTGTTGGTCAGTGTTTGCGAACCATGCGTGTCTTTCCTCCGAATCGAACGGGAACACAACAACACTAGAAAAAATTGGAAAGGAGATTGTTAAAAAGTGCAACGGACTGCCTTTAGCAGCACAGTCGCTTGGAGGCATGTTGAGAAGAAAGCATGACATCGTGGATTGGAATAATATCCTCAATAGTGACATTTGGGAACTTTCTGAAAGTGAGTGTGAAGTTATTCCAGCACTGAGACTTAGTTATCATTATCTCCCTCCACATTTAAAACGGTGCTTTGTTTATTGTTCCTTGTATCCACAAGATTACGAATTTGAAAAATATGAATTAATCTTGTTGTGGATGGCCGAAGATCTTTTGAAGAAATCAAGCAAGGGTAGGACTTTAGAAGAGGTTGGTCATGAGTATTTTGATGATTTGGTTTCGAGATCATTTTTCCAACGTTCAAACACAAGTAGAAGTAGTTGGCCTTATGGCAAATGTTTTGTGATGCATGACCTCATGCATGATCTAGCCACATCACTCGGTGGAGATTTTTACTTTAGATCAGAAGAACTTGGGAATGAAACAAAGATCAAGACCAAGACTCGTCATTTGTCATTTACGAAATTCAATTCTTCAGTCTTGGACAACTTTGATGTTGTTGGTAGAGCAAAATTTCTGAGAACTTTCTTGTCCATTATCAATTTTGAAGCTGCTCCATTCAACAACGAGGAGGCACAATGTATCATAGTGTCGAAGCTTATGTACTTGAGAGTTTTATCATTTCATGACTTCCAAAGTCTGGATTCTTTGCCTGATTCAATAGGTAAATTGATCCATCTGCGCTATTTAGATCTCTCTCGTTCAAGTATAGATACACTGCCAGAGTCATTGTGTAATTTGTACAATCTGCAAACTTTGAAGTTGTGTAGTTGCAGAAAGCTGACTAAGTTGCCTAGTGACATGTGCAATCTTGTTAACTTGCGTCATCTTGAGATACGTGAAACTCCTATAAAAGAGATGCCGAGAGGAATGAGTAAATTAAATCATTTACAACATCTGGATTTCTTTGTTGTGGGAAAGCACGAAGAGAATGGAATCAAAGAATTGGGAGGACTTTCAAATCTTCGTGGTCAACTTGAACTTAGGAACATGGAGAATGTTTCCCAAAGTGATGAAGCGTTGGAGGCAAGGATGATGGATAAAAAACACATTAATAGTTTACTGTTGGAATGGTCTAGATGTAACAACAACAGTACCAACTTCCAACTTGAAATAGATGTGCTTTGCAAGTTACAGCCTCACTTTAACATTGAATCGTTGCAAATAAAAGGCTATAAAGGAACCAGATTTCCAGATTGGATGGGAAATTCTTCCTACTGCAATATGACACGTCTAACCTTAAGTGATTGTGACAACTGTAGTATGCTTCCTTCACTTGAACAGCTACCTTCTCTCAAGTTCCTTGTAATTTCAAGATTGAATAGGCTGAAGACTATCGATGCAGGTTTTTACAAGAATGAAGATTGTCGTTCTTGGAGGCCCTTTCCCTCCCTTGAATCTCTGTTCATTTATGACATGCCTTGTTGGGAGTTGTGGAGTTCCTTTGATTCAGAAGCTTTTCCTTTGCTTAAAAGTCTTAGAATACTTGGCTGCCCCAAACTAGAGGGAAGTTTGCCGAATCACCTTCCTGCTCTGGAAACACTTTATATTAGTGATTGCGAGCTGCTTGTCTCTTCTCTCCCAACAGCTCCCGCCATTCAAAGTTTGGAGATAAGTAAAAGCAATAAAGTAGCATTGCATGCGTTACCTCTCTTGGTAGAGACTATAGAAGTAGAAGGAAGCCCAATGGTGGAGTCTATGATAGAGGCCATCACTAACATCCAACCAACTTGTCTCCGGTCTTTAACATTAAGGGATTGCTCGTCAGCCGTGTCATTTCCGGGTGGTCGTTTACCTGAATCACTGAAGACTCTGCGTATCTGGGATCTTAAAAAACTGGAATTCCCGACGCAACACAAACATGAGTTACTGGAAACACTGACAATAGAAAGCAGTTGTGATTCACTCACATCTCTTCCATTGGTTACCTTTCCAAATCTCAGAGATCTTGCAATCAGAAACTGTGAAAATATGGAATATCTTTTGGTTTCAGGGGCAGAGTCATTTAAGAGTCTGTGTTCTTTGAGAATTTATCAATGCCCCAACTTTGTATCATTCTGGAGAGAAGGATTGCCTGCGCCCAACTTGATTACTTTCAAAGTTTGGGGCTCTGACAAGTTGAAGTCGTTGCCTGATGAGATGAGTACTCTTCTCCCAAAGTTAGAACATCTTTACATATCCTACTGCCCAGAAATTGAGTCGTTTCCAGAAGGGGGTATGCCACCTAACCTGAGAACAGTTTGGATTGTCAATTGTGAGAAACTACTGAGCGGCCTAGCATGGCCATCCATGGGCATGCTTACCCATCTCAGTGTTGGGGGTCGATGTGATGGCATCAAGTCCTTCCCTAAGGAGGGTTTGCTGCCTCCCTCCCTTACGTCTCTGTATCTATATGACTTGTCAAATCTGGAGATGTTGGACTGCACGGGGCTTCTCCATCTCACATCCCTGCAAATATTACACATAGACAATTGTCCTTTGCTGGAGAATATGGCTGGAGAAAGGCTTCCTGTCTCTCTAGTAAAATTAACCATAATGGGATGTCCTTTGCTGGAAAAACGATGCCGCATGAAGCACCCTCAAATTTGGCCTAAAATTTGCCACATACCTGGCATTAAGGTTGACGATAGATGGATTTAG 3747 0.4094 MAAAVVGGAFLSAFLDVLFDRLASPEFVDLILGKKLSKKLLQKLETTLRVVGAVLDDAEKKQTTNTNVKHWLNDLKDAVYEADDLLDHVFTKAATQNKVRNFFSRFSDRKIGSKLEDIVVTLESHLKLKESLDLKESAVENVSWKAPSTSLEDGSHIYGREKDKEAIIKLLSEDNSDGSEVSVVPIVGMGGVGKTTLAQLVYNDENLEEIFDFKAWVCVSQELDILKVTKTITEAVTGKPCKLNDLNLLHLELMDKLKDKEFLIVLDDVWTENYVNWRLLKKPFNRGIRRSKILLTTRSEKTASIVQTVHIYHLNQLSNEDCWSVFANHACLSSESNGNTTTLEKIGKEIVKKCNGLPLAAQSLGGMLRRKHDIVDWNNILNSDIWELSESECEVIPALRLSYHYLPPHLKRCFVYCSLYPQDYEFEKYELILLWMAEDLLKKSSKGRTLEEVGHEYFDDLVSRSFFQRSNTSRSSWPYGKCFVMHDLMHDLATSLGGDFYFRSEELGNETKIKTKTRHLSFTKFNSSVLDNFDVVGRAKFLRTFLSIINFEAAPFNNEEAQCIIVSKLMYLRVLSFHDFQSLDSLPDSIGKLIHLRYLDLSRSSIDTLPESLCNLYNLQTLKLCSCRKLTKLPSDMCNLVNLRHLEIRETPIKEMPRGMSKLNHLQHLDFFVVGKHEENGIKELGGLSNLRGQLELRNMENVSQSDEALEARMMDKKHINSLLLEWSRCNNNSTNFQLEIDVLCKLQPHFNIESLQIKGYKGTRFPDWMGNSSYCNMTRLTLSDCDNCSMLPSLEQLPSLKFLVISRLNRLKTIDAGFYKNEDCRSWRPFPSLESLFIYDMPCWELWSSFDSEAFPLLKSLRILGCPKLEGSLPNHLPALETLYISDCELLVSSLPTAPAIQSLEISKSNKVALHALPLLVETIEVEGSPMVESMIEAITNIQPTCLRSLTLRDCSSAVSFPGGRLPESLKTLRIWDLKKLEFPTQHKHELLETLTIESSCDSLTSLPLVTFPNLRDLAIRNCENMEYLLVSGAESFKSLCSLRIYQCPNFVSFWREGLPAPNLITFKVWGSDKLKSLPDEMSTLLPKLEHLYISYCPEIESFPEGGMPPNLRTVWIVNCEKLLSGLAWPSMGMLTHLSVGGRCDGIKSFPKEGLLPPSLTSLYLYDLSNLEMLDCTGLLHLTSLQILHIDNCPLLENMAGERLPVSLVKLTIMGCPLLEKRCRMKHPQIWPKICHIPGIKVDDRWI* 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0296 1248 PANTHER DISEASE RESISTANCE PROTEIN RP 948 1199 IPR044974 GO:0006952
Gso3g0296 1248 PANTHER DISEASE RESISTANCE PROTEIN RP 23 878 IPR044974 GO:0006952
Gso3g0296 1248 SUPERFAMILY L domain-like 937 1235 - -
Gso3g0296 1248 PRINTS Disease resistance protein signature 183 198 - -
Gso3g0296 1248 PRINTS Disease resistance protein signature 256 270 - -
Gso3g0296 1248 PRINTS Disease resistance protein signature 354 368 - -
Gso3g0296 1248 PRINTS Disease resistance protein signature 876 892 - -
Gso3g0296 1248 Gene3D - 140 311 IPR027417 -
Gso3g0296 1248 Coils Coil 41 61 - -
Gso3g0296 1248 SUPERFAMILY L domain-like 484 900 - -
Gso3g0296 1248 Gene3D - 17 116 - -
Gso3g0296 1248 Gene3D Ribonuclease Inhibitor 544 947 IPR032675 -
Gso3g0296 1248 Gene3D - 402 495 IPR036388 -
Gso3g0296 1248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 417 IPR027417 -
Gso3g0296 1248 PANTHER OS05G0414200 PROTEIN 23 878 - -
Gso3g0296 1248 PANTHER OS05G0414200 PROTEIN 948 1199 - -
Gso3g0296 1248 Pfam Rx N-terminal domain 10 98 IPR041118 -
Gso3g0296 1248 Gene3D - 316 401 IPR042197 -
Gso3g0296 1248 Gene3D Ribonuclease Inhibitor 985 1108 IPR032675 -
Gso3g0296 1248 Pfam NB-ARC domain 160 383 IPR002182 GO:0043531
Gso3g0296 1248 Gene3D Ribonuclease Inhibitor 1109 1230 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0296 Gso-Chr3 4428874 4434624 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0296 180 822 WRKY Transcription Factor Family AT5G45050 22.107 4.22e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0296 - - gmx:100775612 2432.91