Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0286 ATGGCTGCAGCACTGGTCGGTGGTGCCTTTCTCTCTGCTTTCCTTGATGTGCTTTTCGACAGGCTGGCTTCACCTGACTTTGTTGACCTGATCCGTGGAAAGAAGCTTAGCAAGAAGTTGCTTCAAAAGTTGGAGACCACTCTCAGAGTGGTTGGAGCTGTGCTTGATGATGCCGAGAAGAAACAGATCACAAACACCAATGTCAAACACTGGCTCAATGATCTCAAACATGCTGTCTATGAAGCCGATGACTTACTCGACCATGTTTTCACCAAAGCTGCCATCCAAAACAAGGTAAGAGACTTGTTTTCTCGCTTTTCCGATAGCAAGATCATTAGTAAGTTGGAGGACATAGTTGTCACCCTAGAGTCTCGTTTAAAACTCAAGGAGAGTCTTGATTTGAAAGAGAGTGCAGTGGAGAACTTGTCATGGAAAGCTCCATCAACATCTCTGGAAGATGGATCTCATATATATGGTAGGGAGAAAGATAAGGAGGCCATAATCAAGTTGTTGTCGGAGGATAACAGTGACGGTAGTGAAGTGTCTGTGGTTCCTATTGTGGGCATGGGTGGGGTTGGAAAAACTACTTTGGCCCAATTGGTGTACAACGATGAGAATTTGAAAGAGAAATTTGATTTTGATTTTAAGGCATGGGTTTGTGTTTCTCAAGAATTTGATGTTCTGAAGGTCACAAAAACTATAATAGAGGCGGTGACTGGAAAGCCTTGTAACTTGAATGATCTGAATCTACTTCATCTTGAATTGATGGACAAGCTGAAAGATAAAAAATTCTTAATTGTCTTGGATGATGTTTGGACAGAGGATTATGTTGATTGGCGTCTTCTTAAGAAACCATTTAACCGTGGGATTATTAGGAGAAGTAAAATTCTTCTAACAACCCGCAGTGAAAAAACAGCATCTGTAGTCCAAACTGTTCACACCTATCATCTAAACCAATTGTCGAATGAAGATTGTTGGTCAGTGTTTGCGAACCATGCGTGTCTTTACTCCGAATCGAACGAGAACACAACAACACTAGAAAAAATTGGAAAGGAGATTATTAAAAAGTGCAACGGACTGCCTTTAGCAGCAGAGTCGCTTGGAGGCATGTTGAGAAGAAAGCATGACATTGGTGATTGGAATAATATTCTGAATAGTGACATTTGGGAACTTTCTGAAAGTGAGTGTAAAGTTATTCCAGCACTGAGACTTAGTTATCATTATCTCCCTGCACATTTAAAACGGTGCTTTGTTTATTGTTCGTTGTATCCACAAGATTACGAATTTGAAAAAAATGAATTAATCTTGTTGTGGATGGCTGAAGATCTTTTGAAGAAACCAAGGAAAGGTAGGACTTTAGAAGAGGTTGGTCATGAGTATTTTGATGATTTGGTTTCGAGATCGTTTTTCCAACGTTCAAGTACAAGTAGTTGGCCTCATCGCAAATGTTTTGTGATGCATGACCTCATGCATGATCTAGCCACATCACTCGGTGGAGATTTTTATTTTAGATCAGAAGAACTTGGGAAAGAAACAAAGATCAATACTAAGACTCGTCATTTGTCATTTGCCAAATTCAATTCTTCAGTCTTGGACAACTTTGATGTTATTGGTAGAGCAAAATTTCTGAGAACTTTCTTGTCTATTATCAATTTTGAGGCTGCTCCATTCAACAACGAGGAGGCACAATGTATCATAGTGTCGAAGCTTATGTACTTGAGAGTTTTATCATTTCATGACTTCCAAAGTCTGGATTCTTTGCCTGACTCAATAGGTAAATTGATCCATCTGCGCTATTTAGATCTCTCTCGTTCAAGTGTAGAAACACTGCCAAAGTCAGTGTGTAATTTATACAATCTGCAAACTTTGAAGTTGTATGGTTGCATCAAACTGACTAAGTTGCCTAGTGACATGTGCAATCTTGTTAACTTGCGTCATCTTGGTATTGCTGATGCTCCTATAAAAGAGATGCCGAGAGGAATGAGTAAATTAAATCATTTACAACATCTGGATTTCTTTGCTGTGGGCAAGCACGAAGAGAATGGAATCAAAGAATTGGGAGCACTTTCAAATCTTCGTGGTCAACTTGAACTTAGGAACTTGGAGAATGTTTCCCAAAGTGATGAAGCGTTGGAGGCAAGGATGATGGATAAAAAACACATTAATAGTTTACAGTTGGAATGGTCTGGATGTAACAACAACAGTACCAACTTCCAACTTGAAATAGATGTGCTTTGCAAGTTACAGCCTCACTTTAACATTGAATCGTTGGAAATAAAAGGTTATGAAGGAACCAGATTTCCAGATTGGATGGGAAATTCTTCCTACTGCAATATGATTAGTCTAAAATTGCGTGATTGTGACAACTGTAGTATGCTTCCTTCACTTGGACAACTACCTTCTCTCAAGGTCCTTGAAATTTCAAGATTGAATAGGCTGAAGACTATTGATGCAGGTTTCTACAAGAATGAAGAATGTCGTTCTGGGACGTCCTTTCCCTCCCTTGAATCTCTGTTCATTGATAACATGCCTTGTTGGGAGGTGTGGAGTTCCTTCGAGTCAGAAGCTTTTCCTGTGCTTAAAAGTCTTTACATAAATGACTGCCCCAAACTAGAGGGAAGTTTGCCGAATCACCTTCCTGCTCTGACAACACTTGTGATTAGAAATTGCGAGCTGCTTGTCTCTTCTCTCCCAACGGCTCCCGCCATTCAAAGTTTGGAGATATGTAAAAGCAATAAAGTAGCACTGCATGCGTTTCCTCTCTTGGTAGAAACTATAGAAGTAGAAGGAAGCCCAATGGTGGAGTCCATGATCGAGGCCATCACTAACATCCAACCAACTTGTCTCCTGTCTTTAAAATTAAGGGATTGCTCGTCAGCCGTGTCATTTCCGGGTGGTCGTTTACCAGAATCACTGAAGAGTCTGAGTATCAAGGATCTTAAAAAACTGGAATTCCCGACGCAACACAAACATGAGTTACTGGAAACACTGTCAATAGAAAGCAGTTGTGATTCACTCACATCTCTTCCATTGGCTACCTTTCCAAATCTCAGAGATCTCACAATCGGAAAGTGTGAAAATATGGAATATCTTTTGGTTTCAGGGGCAGAGTCATTTAAGAGTCTGTGTTCTTTGAGTATTTACCAATGCCCCAACTTTGTATCATTCTGGAGAGAAGGATTGCCTGCGCCCAACTTGATTAATTTCAGGGTTTGGGGCTCTGACAAATTGAAGTCGTTGCCTGATGATCTCGTCATATCCAACTGCCGAGAAATTGAGTCGTTTCCAGAAGGGGGTATGCCACCTAACCTGAGAACAGTTTGGATTGAGAATTGTGAGAAACTACTGAGCGGCCTAGCATGGCCATCCATGGGCATTCTTACTTATCTCTGTGTTGGGGGTCGATGTGATGGCATCAAGTCCTTCCCTAAGGAGGGTTTGCTACCTCCCTCCCTTACGTATCTGTATCTATATGACATGTCAAATCTGGAGATGTTGGACTGCACGGGGCTTCTCCATCTCACGTCCCTGCAAGAATTAACCATAGAGAGATGTCCTTTGCTGGAAAATATGGTGGGAGAAAGGCTTCCTGTCTCTCTAATAAAATTAACCATATGGGGATGTCCTTTGCTGGAAAAACGATGCCGCATGAAGCGCCCTCAAATTTGGCCTAAAATTTGCCACATCCCTGGCATTAAGGTTGACGATAGATGGATTTAG 3720 0.4105 MAAALVGGAFLSAFLDVLFDRLASPDFVDLIRGKKLSKKLLQKLETTLRVVGAVLDDAEKKQITNTNVKHWLNDLKHAVYEADDLLDHVFTKAAIQNKVRDLFSRFSDSKIISKLEDIVVTLESRLKLKESLDLKESAVENLSWKAPSTSLEDGSHIYGREKDKEAIIKLLSEDNSDGSEVSVVPIVGMGGVGKTTLAQLVYNDENLKEKFDFDFKAWVCVSQEFDVLKVTKTIIEAVTGKPCNLNDLNLLHLELMDKLKDKKFLIVLDDVWTEDYVDWRLLKKPFNRGIIRRSKILLTTRSEKTASVVQTVHTYHLNQLSNEDCWSVFANHACLYSESNENTTTLEKIGKEIIKKCNGLPLAAESLGGMLRRKHDIGDWNNILNSDIWELSESECKVIPALRLSYHYLPAHLKRCFVYCSLYPQDYEFEKNELILLWMAEDLLKKPRKGRTLEEVGHEYFDDLVSRSFFQRSSTSSWPHRKCFVMHDLMHDLATSLGGDFYFRSEELGKETKINTKTRHLSFAKFNSSVLDNFDVIGRAKFLRTFLSIINFEAAPFNNEEAQCIIVSKLMYLRVLSFHDFQSLDSLPDSIGKLIHLRYLDLSRSSVETLPKSVCNLYNLQTLKLYGCIKLTKLPSDMCNLVNLRHLGIADAPIKEMPRGMSKLNHLQHLDFFAVGKHEENGIKELGALSNLRGQLELRNLENVSQSDEALEARMMDKKHINSLQLEWSGCNNNSTNFQLEIDVLCKLQPHFNIESLEIKGYEGTRFPDWMGNSSYCNMISLKLRDCDNCSMLPSLGQLPSLKVLEISRLNRLKTIDAGFYKNEECRSGTSFPSLESLFIDNMPCWEVWSSFESEAFPVLKSLYINDCPKLEGSLPNHLPALTTLVIRNCELLVSSLPTAPAIQSLEICKSNKVALHAFPLLVETIEVEGSPMVESMIEAITNIQPTCLLSLKLRDCSSAVSFPGGRLPESLKSLSIKDLKKLEFPTQHKHELLETLSIESSCDSLTSLPLATFPNLRDLTIGKCENMEYLLVSGAESFKSLCSLSIYQCPNFVSFWREGLPAPNLINFRVWGSDKLKSLPDDLVISNCREIESFPEGGMPPNLRTVWIENCEKLLSGLAWPSMGILTYLCVGGRCDGIKSFPKEGLLPPSLTYLYLYDMSNLEMLDCTGLLHLTSLQELTIERCPLLENMVGERLPVSLIKLTIWGCPLLEKRCRMKRPQIWPKICHIPGIKVDDRWI* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0286 1239 PANTHER DISEASE RESISTANCE PROTEIN RP 20 878 IPR044974 GO:0006952
Gso3g0286 1239 PANTHER DISEASE RESISTANCE PROTEIN RP 948 1190 IPR044974 GO:0006952
Gso3g0286 1239 Pfam NB-ARC domain 160 386 IPR002182 GO:0043531
Gso3g0286 1239 Coils Coil 41 61 - -
Gso3g0286 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 420 IPR027417 -
Gso3g0286 1239 Gene3D - 21 122 - -
Gso3g0286 1239 SUPERFAMILY L domain-like 485 904 - -
Gso3g0286 1239 Gene3D Ribonuclease Inhibitor 545 948 IPR032675 -
Gso3g0286 1239 Gene3D - 139 315 IPR027417 -
Gso3g0286 1239 PANTHER OS05G0414200 PROTEIN 20 878 - -
Gso3g0286 1239 PANTHER OS05G0414200 PROTEIN 948 1190 - -
Gso3g0286 1239 Pfam Rx N-terminal domain 10 97 IPR041118 -
Gso3g0286 1239 SUPERFAMILY L domain-like 939 1226 - -
Gso3g0286 1239 PRINTS Disease resistance protein signature 183 198 - -
Gso3g0286 1239 PRINTS Disease resistance protein signature 258 272 - -
Gso3g0286 1239 PRINTS Disease resistance protein signature 357 371 - -
Gso3g0286 1239 PRINTS Disease resistance protein signature 797 813 - -
Gso3g0286 1239 Gene3D - 319 404 IPR042197 -
Gso3g0286 1239 Gene3D Ribonuclease Inhibitor 1100 1220 IPR032675 -
Gso3g0286 1239 Gene3D Ribonuclease Inhibitor 970 1099 IPR032675 -
Gso3g0286 1239 Gene3D - 405 496 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0286 Gso-Chr3 4229050 4233617 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0286 584 672 WRKY Transcription Factor Family AT4G12020 37.778 1.91e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0286 - - gmx:100784015 2208.72