Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0284 ATGGCAGCAGCAGTGGTAGGTGGTGCCTTTCTCTCTGCTTTCCTTGATGTGCTTTTCGACAGGCTGGCTTCACCTGAGTTTGTTGACTTGATCCTTGGAAAGAAGCTTAGCAAGAAGTTGCTTCAAAAGTTGGAGACCACTCTGAGAGTGGTTGGAGCTGTGCTTGATGATGCCGAGAAGAAACAGATCACAAACACCAATGTCAAACACTGGCTCAATGATCTCAAAGATGCTGTCTATGAAGCCGATGACTTACTCGACCATGTTTTCACCAAAGCTGCCACCCAAAACAAGGTAAGAAACTTTTTTTCTCGCTTTTCCAATAGGAAGATCGGTAGTAAGTTGGAGGACATAGTTGTCACACTTGAGTCTCATTTAAAACTCAAGGAGAGTCTTGATTTGAAAGAGAGTGCAGTGGAGAACGTGTCATGGAAAGCTCCATCAACATCTCTGGAAGATGGATCTCATATATATGGTAGGGAGAAAGATATGGAGGCCATAATCAAGTTGTTGTCGGAGGATAACAGTCACGGTAGTGAAGTGTCTGTGGTTCCTATTGTGGGCATGGGTGGGGTTGGAAAAACTACTTTGGCCCAATTGGTGTACAATGATGAGAATTTGGAAGAGATATTTGACTTTAAGGCATGGGTTTGTGTTTCTCAAGAACTTGATATTCTGAAGGTCACAAAAACTATAACAGAGGCGGTTACTGGAAAGCCTTGTAAATTGAATGATCTGAATCTACTTCATCCTGAATTGATGGACAAGCTGAAAGATAAAGAATTCTTAATTGTCTTGGATGATGTTTGGACAGAGAATTATGTTAACTGGAGACTTCTTAAGAAACCATTTAACCGTGGGATTAGGAGAAGTAAGATTCTTCTAACAACCCGCAGTGAAAAAACAGCCTCTATAGTCCAAACTGTTCACATCTATCATCTAAACCAATTGTCGAATGAAGATTGTTGGTCAGTGTTTGCGAACCATGCGTGTCTTTCCTCCGAATCGAACGGGAACACAACAACACTAGAAAAAATTGGAAAGGAGATTGTTAAAAAGTGCAACGGACTGCCTTTAGCAGCACAGTCGCTTGGAGGCATGTTGAGAAGAAAGCATGACATCGTGGATTGGAATAATATTCTCAATAGTGACATTTGGGAACTTTCTGAAAGTGAGTGTGAAGTTATTCCAGCACTGAGACTTAGTTATCATTATCTCCCTCCACATTTAAAACGGTGCTTTGTTTATTGTTCCTTGTATCCACAAGATTACGAATTTGAAAAATATGAATTAATCTTGTTGTGGATGGCCGAAGATCTTTTGAAGAAATCAAGCAAAGGTAGGACTTTAGAAGAGGTTGGTCATGAGTATTTTGATGATTTGGTTTCGAGATCATTTTTCCAACGATCAAATACAAGTCGTTGGTCTCATCCGAAATTTTTTGTGATGCATGACCTCATGCATGATCTAGCGACGTCACTCGGTTGA 1488 0.4059 MAAAVVGGAFLSAFLDVLFDRLASPEFVDLILGKKLSKKLLQKLETTLRVVGAVLDDAEKKQITNTNVKHWLNDLKDAVYEADDLLDHVFTKAATQNKVRNFFSRFSNRKIGSKLEDIVVTLESHLKLKESLDLKESAVENVSWKAPSTSLEDGSHIYGREKDMEAIIKLLSEDNSHGSEVSVVPIVGMGGVGKTTLAQLVYNDENLEEIFDFKAWVCVSQELDILKVTKTITEAVTGKPCKLNDLNLLHPELMDKLKDKEFLIVLDDVWTENYVNWRLLKKPFNRGIRRSKILLTTRSEKTASIVQTVHIYHLNQLSNEDCWSVFANHACLSSESNGNTTTLEKIGKEIVKKCNGLPLAAQSLGGMLRRKHDIVDWNNILNSDIWELSESECEVIPALRLSYHYLPPHLKRCFVYCSLYPQDYEFEKYELILLWMAEDLLKKSSKGRTLEEVGHEYFDDLVSRSFFQRSNTSRWSHPKFFVMHDLMHDLATSLG* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0284 495 PRINTS Disease resistance protein signature 183 198 - -
Gso3g0284 495 PRINTS Disease resistance protein signature 256 270 - -
Gso3g0284 495 PRINTS Disease resistance protein signature 354 368 - -
Gso3g0284 495 Coils Coil 41 61 - -
Gso3g0284 495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 417 IPR027417 -
Gso3g0284 495 PANTHER DISEASE RESISTANCE RPP13-LIKE PROTEIN 1-RELATED 19 493 - -
Gso3g0284 495 Pfam NB-ARC domain 160 383 IPR002182 GO:0043531
Gso3g0284 495 Gene3D - 17 117 - -
Gso3g0284 495 Gene3D - 402 493 IPR036388 -
Gso3g0284 495 Gene3D - 316 401 IPR042197 -
Gso3g0284 495 Pfam Rx N-terminal domain 10 98 IPR041118 -
Gso3g0284 495 Gene3D - 138 311 IPR027417 -
Gso3g0284 495 PANTHER DISEASE RESISTANCE PROTEIN RP 19 493 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0284 Gso-Chr3 4146965 4149818 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0284 157 371 WRKY Transcription Factor Family AT5G45050 25.000 7.93e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0284 - - gsj:114405954 964.14