Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0281 ATGGCAGCAGCACTGGTCGGTGGTGCCTTTCTCTCTGCTTTTCTTGATGTGGTTTTCGACAGGCTGGCTTCACCTGAGTTTGTTGACTTGATCCGTGGAAAGAAGCTTAGCAAGAAGTTGCTTCAAAAGTTGGAGACCACTCTCAGAGTGGTTGGAGCTGTGCTTGATGATGCCGAGAAGAAACAGATCACAGACACCAATGTCAAACACTGGCTCAATGCTCTCAAAGATGCTGTCTATGAAGCCGATGACTTACTCGACCATGTTTTCACCAAAGCTGCCACCCAAAACAAGGTAAGAGACTTGTTTTCTCGCTTTTCCGATAGCAAGATCGTTAGTAAGTTGGAAGACATAGTTGTCACACTTGAGTCTCATTTAAAACTCAAGGAGAGTCTTGATTTGAAAGAGAGTGCAGTGGAGAACTTGTCATGGAAAGCTCCATCAACATCTCTGGAAGATGGATCTCATATATATGGTAGGGAGAAAGATAAGGAGGCCATAATCAAGTTGTTGTCGGAGGATAACAGTGACGGTAGAGAAGTGTCTGTGGTTCCTATTGTGGGCATGGGTGGGGTTGGAAAAACTACTTTGGCCCAATTGGTGTACAATGATGAGAATTTGAAACAGATATTTGATTTTGATTTTAAGGCATGGGTTTGTGTTTCTCAAGAATTTGATGTTCTCAAGGTCACAAAAACTATAATAGAGGCGGTGACTGGAAAGGCTTGTAAATTGAATGATCTGAATCTACTTCATCTTGAATTGATGGACAAGCTGAAAGATAAAAAATTCTTAATTGTTTTGGATGATGTTTGGACAGAGGATTATGTTGATTGGCGTCTTCTTAAGAAACCATTTAACCGTGGGATTAGGAGAAGTAAGATTCTTCTAACAACCCGCAGTGAAAAAACAGCATCTATAGTCCAAACTGTTCACACCTATCATCTAAACCAATTGTCGAATGAAGATTGTTGGTCAGTGTTTGCGAACCATGCGTGTCTTTACTCCGAATCGAACGGGAACACAACAACACTAGAAAAAATTGGAAAGGAGATTGTTAAAAAGTGCAACGGACTGCCTTTAGCAGCAGAGTCGCTTGGAGGCATGTTGAGAAGAAAGCATGACATTGGTGATTGGAATAATATTCTCAATAGTGACATTTGGGAACTTTCTGAAAGTGAGTGTAAAGTTATTCCAGCACTGAGACTTAGTTATCATTATCTCCCTCCACATTTAAAACGATGCTTTGTTTATTGTTCGTTGTATCCACAAGATTACGAATTTGAAAAAAATGAATTAATCTTGTTGTGGATGGCTGAAGATCTTTTGAAGAAACCAAGGAAAGGTAGGACTTTAGAAGAGGTTGGTCATGAGTATTTTGATGATTTGGTTTCGAGATCATTTTTCCAACGTTCAAACACAAGTAGAAGTAGTTGGCCTTATGGCAAATGTTTTGTGATGCATGACCTCATGCATGATCTAGCCACATCACTCGGTGGAGATTTTTACTTTAGATCAGAAGAACTTGGGAAAGAAACAAAGATCAACACCAAGACTCGTCATTTGTCATTTGCCAAATTCAATTCTTCAGTCTTGGACAACTTTGATGTTGTTGGTAGAGCAAAATTTCTGAGAACTTTCTTGTCCATTATAAATTTTGAAGCTGCTCCATTCAACAATGAGGAGGCACAATGTATCATAATGTCGAAGCTTATGTACTTGAGAGTTTTATCATTTTGTGACTTCCAAAGTCTGGATTCTTTGCCTGACTCAATAGGTAAATTGATCCATCTGCGCTATTTAGATCTCTCTTTTTCAAGTGTAGAAACACTGCCAAAGTCATTATGTAATTTATACAATCTGCAAACTTTGAAGTTGTGTAGTTGCAGAAAGCTGACTAAGTTGCCTAGTGACATGTGCAATCTTGTTAACTTGCGTCATCTTGAGATACTTGGAACTCCTATAAAAGAGATGCCGAGAGGAATGAGTAAATTAAATCATTTACAACATCTGGATTTCTTTGCTGTGGACAAGCACGAAGAGAATGGAATCAAAGAATTGGGAGCACTTTCAAATCTTCGTGGTCAACTTGAAATTAGGAACTTGGAGAATGTTTCCCAAAGTGATGAAGCGTTGGAGGCAAGGATGATGGATAAAAAACACATTAATAGTTTACAGTTGGAATGGTCTGGATGTAACAACAACAGTACCAACTTCCAACTTGAAATAGATGTGCTTTGCAAGTTACAGCCTCACTTTAACATTGAATCGTTGTATATAAAAGGCTATAAAGGAACCAGATTTCCAGATTGGATGGGAAATTCTTCCTACTGCAATATGATGAGTCTAAAATTGCGTGATTGTGACAACTGTAGTATGCTTCCTTCACTTGGACAACTACCTTCTCTCAAGGTCCTTAAGATTGCACGATTGAATAGGCTGAAGACTATTGATGCAGGTTTTTACAAGAACGAAGATTGTCGTTCTGGGACGCCCTTTCCCTCCCTTGAATCTCTGTTCATTTATGAAATGCCTTGTTGGGAGGTGTGGAGTTCCTTCGATTCAGAAGCTTTTCCTGTGCTTGAAATTCTTGAAATACGTGACTGCCCCAAACTAGAGGGAAGTTTGCCGAATCACCTTCCTGCTCTGAAAACACTTACAATTAGAAATTGTGAGCTGCTTGGCTCTTCTCTCCCAACGGCTCCCGCCATTCAAAGTTTGGAGATATGTAAAAGCAATAAAGTAGCACTGCATGCGTTACCTCTCTTAGTAGAGACTATAGAAGTAGAAGGAAGCCCAATGGTGGAGTCTATGATAGAGGCCATCACAAACATCCAACCAACTTGTCTCCGGTCTTTAACATTAAGGGATTGCTCGTCAGCCGTGTCATTTCCGGGTGGTCGTTTACCTGAATCACTGAAGACTCTGTATATCTCGGATCTTAAAAAACTGGAATTCCCGACGCAACACAAACATGAGTTACTGGAAACACTGTCAATAGAAAGCAGTTGTGATTCACTCACATCTCTTCCATTGGTTACCTTTCCAAATCTCAGAGATGTCACAATCGGAAAGTGTGAAAATATGGAATATCTTTTGGTTTCAGGGGCAGAGTCATTTAAGAGTCTGTGTTCTTTGAGTATTTACCAATGCCCCAACTTTGTATCATTCGGGAGAGAAGGATTGCCTGAAGAGATGAGTACTCTTCTCCCAAAGTTAGAATATCTCGACATATCCAACTGCCCAGAAATTGAGTCCTTTCCAGAAGGGGGTATGCCACCTAACCTGAGAACAGTTTGGATTGTGAATTGTGAGAAACTACTGAGCGGCCTAGCATGGCCATCCATGGGCATGCTTACTCATCTCAATGTTGGGGGTCCATGTGATGGCATCAAGTCCTTCCCTAAAGAGGGTTTGCTGCCTCCCTCCCTTACGTCTCTGTATCTATTTAAGTTTTCAAATCTGGAGATGTTAGACTGCACGGGGCTTCTCCATCTCACATCCCTGCAACAATTAACCATGAGGGGATGTCCTTTGCTGGAGAATATGGCTGGAGAAAGGCTTCCTGACTCTCTAATAAAATTAACCATATGGGAATGTCCTTTGCTGGAAAAACGATGCCGGAAGAAGCACCCTCAAATTTGGCCTAAAATTTCCCACATCCCTGGCATTCAGGTTGATGATAGATGGATTTAG 3696 0.4067 MAAALVGGAFLSAFLDVVFDRLASPEFVDLIRGKKLSKKLLQKLETTLRVVGAVLDDAEKKQITDTNVKHWLNALKDAVYEADDLLDHVFTKAATQNKVRDLFSRFSDSKIVSKLEDIVVTLESHLKLKESLDLKESAVENLSWKAPSTSLEDGSHIYGREKDKEAIIKLLSEDNSDGREVSVVPIVGMGGVGKTTLAQLVYNDENLKQIFDFDFKAWVCVSQEFDVLKVTKTIIEAVTGKACKLNDLNLLHLELMDKLKDKKFLIVLDDVWTEDYVDWRLLKKPFNRGIRRSKILLTTRSEKTASIVQTVHTYHLNQLSNEDCWSVFANHACLYSESNGNTTTLEKIGKEIVKKCNGLPLAAESLGGMLRRKHDIGDWNNILNSDIWELSESECKVIPALRLSYHYLPPHLKRCFVYCSLYPQDYEFEKNELILLWMAEDLLKKPRKGRTLEEVGHEYFDDLVSRSFFQRSNTSRSSWPYGKCFVMHDLMHDLATSLGGDFYFRSEELGKETKINTKTRHLSFAKFNSSVLDNFDVVGRAKFLRTFLSIINFEAAPFNNEEAQCIIMSKLMYLRVLSFCDFQSLDSLPDSIGKLIHLRYLDLSFSSVETLPKSLCNLYNLQTLKLCSCRKLTKLPSDMCNLVNLRHLEILGTPIKEMPRGMSKLNHLQHLDFFAVDKHEENGIKELGALSNLRGQLEIRNLENVSQSDEALEARMMDKKHINSLQLEWSGCNNNSTNFQLEIDVLCKLQPHFNIESLYIKGYKGTRFPDWMGNSSYCNMMSLKLRDCDNCSMLPSLGQLPSLKVLKIARLNRLKTIDAGFYKNEDCRSGTPFPSLESLFIYEMPCWEVWSSFDSEAFPVLEILEIRDCPKLEGSLPNHLPALKTLTIRNCELLGSSLPTAPAIQSLEICKSNKVALHALPLLVETIEVEGSPMVESMIEAITNIQPTCLRSLTLRDCSSAVSFPGGRLPESLKTLYISDLKKLEFPTQHKHELLETLSIESSCDSLTSLPLVTFPNLRDVTIGKCENMEYLLVSGAESFKSLCSLSIYQCPNFVSFGREGLPEEMSTLLPKLEYLDISNCPEIESFPEGGMPPNLRTVWIVNCEKLLSGLAWPSMGMLTHLNVGGPCDGIKSFPKEGLLPPSLTSLYLFKFSNLEMLDCTGLLHLTSLQQLTMRGCPLLENMAGERLPDSLIKLTIWECPLLEKRCRKKHPQIWPKISHIPGIQVDDRWI* 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0281 1231 Pfam NB-ARC domain 160 385 IPR002182 GO:0043531
Gso3g0281 1231 Coils Coil 41 61 - -
Gso3g0281 1231 Gene3D Ribonuclease Inhibitor 715 916 IPR032675 -
Gso3g0281 1231 Gene3D Ribonuclease Inhibitor 560 714 IPR032675 -
Gso3g0281 1231 PANTHER OS05G0414200 PROTEIN 950 1183 - -
Gso3g0281 1231 PANTHER OS05G0414200 PROTEIN 14 879 - -
Gso3g0281 1231 Pfam Rx N-terminal domain 10 98 IPR041118 -
Gso3g0281 1231 PANTHER DISEASE RESISTANCE PROTEIN RP 950 1183 IPR044974 GO:0006952
Gso3g0281 1231 PANTHER DISEASE RESISTANCE PROTEIN RP 14 879 IPR044974 GO:0006952
Gso3g0281 1231 Gene3D Ribonuclease Inhibitor 917 1209 IPR032675 -
Gso3g0281 1231 Gene3D - 318 403 IPR042197 -
Gso3g0281 1231 SUPERFAMILY L domain-like 948 1218 - -
Gso3g0281 1231 PRINTS Disease resistance protein signature 183 198 - -
Gso3g0281 1231 PRINTS Disease resistance protein signature 258 272 - -
Gso3g0281 1231 PRINTS Disease resistance protein signature 356 370 - -
Gso3g0281 1231 PRINTS Disease resistance protein signature 878 894 - -
Gso3g0281 1231 Gene3D - 404 497 IPR036388 -
Gso3g0281 1231 Gene3D - 20 119 - -
Gso3g0281 1231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 419 IPR027417 -
Gso3g0281 1231 SUPERFAMILY L domain-like 486 904 - -
Gso3g0281 1231 Gene3D - 140 314 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0281 Gso-Chr3 3989584 4012477 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0281 175 824 WRKY Transcription Factor Family AT5G45050 21.586 1.32e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0281 - - gmx:100777231 2248.01