Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso3g0259 | ATGGACCCAACAACAAACCTTGTTGAGTTTTCATCTCAGAATTTGGAAGCATGTACCAACAATTTCAGTCAGAGCAATCTCATTGGCTTGACAAAGTTTGGTAGATTGTATAGAGGCATCCTTGAAGGTCAACATGTAGTAGTGAAGATATGGGATGGTGAAAGAATGGAACAGTTAAGTTCCAAATATGATGATGAGAATTTGATTATCAAAGAGGAAGTAAAATTTTGGACTAATCCAACATTAAGAGGTTACCCCAATTTGGTGAAGTTGATTGGTTATACTTGGGAGAGAGATGCAAAGGGACTTGTTTATGATCTCAATCCACTTGATACTTTGGATAACGTAATAATGAAAGATAACCTGAATTGGCTTCAGAGAATAAATGTAATTCATGAACTTGCAAAGCTCCTGAAATTCATTCATGACCAGGAAAAGCAAAATATGGTGTTGAATATCAGTGCATCTCATATTCTTCTCGACAAGGATTACAAGCCAAATTTTATTGATTTGGTGTTGCTTAGTGAAGTGACAATGCTAAGGGAACAACTAACAATGTCAACTAGCTACATCAATCCTTATTTTTCTCTAAGGGGTGGTGAATGGGATAGAAGCTGTGAAGTGTTCTCATTTGGCATTGTTTTGCTTGAACTAATAACCAAAAGAGTTTCAGTCATTGGGAAGAGAGAACATGCAAGCATAAACTTGGACGGTGTGGTTCATATTTGGGCCAAGAAAGAATACAAGCCAAATTGTTCTCTTGTCCATGAAACTTTGCAGGAAGATTGGTGTTACTGTGCTGAAGATGGTGTTTCAATAACTTTATTGGCATTGCAATGCATAGAATTTTTTCCAGCAAACCGTCCAACAATGAGGGATGTCTTGCACAGGCTAGATAATCTTTTGGTGTTACAACGTATGGCTGATGCTAGAGCAACCAAAAGGGAAAAGCAACTCATTTCATCCTGA | 969 | 0.3746 | MDPTTNLVEFSSQNLEACTNNFSQSNLIGLTKFGRLYRGILEGQHVVVKIWDGERMEQLSSKYDDENLIIKEEVKFWTNPTLRGYPNLVKLIGYTWERDAKGLVYDLNPLDTLDNVIMKDNLNWLQRINVIHELAKLLKFIHDQEKQNMVLNISASHILLDKDYKPNFIDLVLLSEVTMLREQLTMSTSYINPYFSLRGGEWDRSCEVFSFGIVLLELITKRVSVIGKREHASINLDGVVHIWAKKEYKPNCSLVHETLQEDWCYCAEDGVSITLLALQCIEFFPANRPTMRDVLHRLDNLLVLQRMADARATKREKQLISS* | 323 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso3g0259 | 322 | Pfam | Protein kinase domain | 23 | 296 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso3g0259 | 322 | PANTHER | RECEPTOR-LIKE KINASE | 5 | 310 | - | - | |
Gso3g0259 | 322 | SMART | serkin_6 | 22 | 302 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso3g0259 | 322 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 107 | - | - | |
Gso3g0259 | 322 | Gene3D | Transferase(Phosphotransferase) domain 1 | 110 | 320 | - | - | |
Gso3g0259 | 322 | PANTHER | OS01G0588500 PROTEIN-RELATED | 5 | 310 | - | - | |
Gso3g0259 | 322 | ProSiteProfiles | Protein kinase domain profile. | 22 | 302 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso3g0259 | 322 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 298 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso3g0259 | Gso-Chr3 | 3681680 | 3684359 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso3g0259 | 4 | 300 | Receptor kinase-like Gene Family | AT4G23320 | 29.430 | 2.77e-30 | 118 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Gso3g0259 | Pkinase | 2.7e-11 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso3g0259 | - | - | gmx:102662076 | 653.284 |