Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0253 ATGAAGGTCATGCCCTTGCCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCTTCAGCCTCAGATTCATTTTCAGTGCTTTTGCATAACCCACAACCAAAGTGGACCATAGACAAAGAGGACTATTGCTATGTGGGCAGCATCACTGAGCCCACCTCAGTTCTTGGCTCCAGAAGAAGCCTTAGCCCTCCCACTTCCTCCTCCACAATGTCTTCTTCTCTTGGCAGCAGCAACAACAGCACTAGCAAGGGTGGTGGTGGCACCTCAGCCAACACCACCAACAACCCAACACCACCCTCAGACTACAACAACAACAACCCTCCTCAGGAATCCAGCCCCGAAAAATGTGGCATCAGGATGGAGGACTGGGAGTGCCAAGATCAATCCATCCTGAGGCTAATCATGGGGGATGTTGAAGACCCTTCTGCTGGATTGAGCAAGCTTCTGCAAAGCACTGCCTGTGGCTCTCAAAGTGCTGATTTCAATGCTGGATTTGGTGTTGTGGATCAACAAGGATTGAATATGAATATGAATATGAATATGGTGGGTGGTAATATTGACCCAAATTACCCTGCTGGTTTCCCTTTCATTGCTGAGAATATGGATGGCCAGAATGCCAAGGCTGGTTCTGGGACTGGCCAGGTTTCAGAATCTGTTGTTTTCTCTGCCAACAATCCTCTCATGGTGTCATCATCTGTTTCCCCTGGTGTGTTCACTTCTCAGCAGCAGCAGCAAGAGTTTGGAGTGGTGGATGAGAAGCCTCAGGTGCAGGAACAGCAGGTTTTCTCTCAGCATCAGGCGAAACACCATCTCTTTGACACCATTGGGCACAATTTTCAAGCTCCAAGGTTGTCCCTTTTGGATTCAGGGCAAGAAGTGTTTGGTAGGAGGCAGCAAACACAGCTTCCATTGTTTCCTCACCATATGCAGCAACAACAACAACAACAATCAATGGTTATGCCTTCTACTAAACAGCAGAAGGTGAGTTCCACCGGAGACGATGCAAGCCACCAGCTTCAGCAGGCTATATTTGATCAGTTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCTATTGGTAGGCCTTTTCAGAGGGCTGCTTTCTACATGAAGGAGGCCTTGATGTCACTGCTTCATTCAAATGCTCACAGTTTCATGGCTTTTTCGCCAATTAGTTTCATTTTTAAAATTGGAGCTTATAAGTCCTTTTCTGAGATATCACCTGTTCTTCAGTTTGCCAATTTTACTTGCAACCAAGCCCTCATTGAAGCTGTGGAAAGGTCTGACAGAATTCATGTTATCGATTTCGATATTGGGTTTGGAGTGCAGTGGTCATCTTTTATGCAAGAGATTGCCTTGAGAAGTAGTGGTGCACCTTCACTCAAAGTCACTGCCATTGTGTCACCCTCCACTTGTGATGAGGTTGAGCTCAATTTCACTAGAGAGAATTTGATTCAATACGCGAAAGACATCAATGTGTCATTTGAATTCAATGTTTTGAGCATTGAATCCTTGAACTCTCCTTCCTGTCCACTGCTTGGTAAATTCTTTGATAATGAGGCAATTGTGGTGAATATGCCAGTCTCAAGTTTCACAAACTATCCATCATTGTTCCCTTCCGTTCTTCACTTTGTGAAGCAACTCAGGCCAAAAGTTGTGGTCACTTTGGACAGAATTTGTGATCAAATGGATGTACCACTTCCTACCAACGTAGTCCATGTTCTCCAATGTTATTCGGCCCTGCTTGAATCGTTGGATGCGGTGAATGTGAATCTTGATGTCCTCCAAAAGATTGAGAGGCATTTCATCCAGCCAGCTATCAAGAAAATTATACTTGGCCACCACCATTTTCAAGAAAAATTACCCCCATGGAGGAACCTCTTTATGCAATCTGGATTCTCTCCATTCACATTTAGCAACTTCACAGAAGCTCAAGCTGAGTGTCTAGTTCAGAGGGCACCTGTGAGGGGATTTCATGTGGAGAGGAAGCCTTCATCACTTGTTCTATGCTGGCAGAAGAAAGAACTCATCTCAGTTTCTACTTGGAGATGCTGA 2112 0.4536 MKVMPLPFEEFQGKGVLDFSSASDSFSVLLHNPQPKWTIDKEDYCYVGSITEPTSVLGSRRSLSPPTSSSTMSSSLGSSNNSTSKGGGGTSANTTNNPTPPSDYNNNNPPQESSPEKCGIRMEDWECQDQSILRLIMGDVEDPSAGLSKLLQSTACGSQSADFNAGFGVVDQQGLNMNMNMNMVGGNIDPNYPAGFPFIAENMDGQNAKAGSGTGQVSESVVFSANNPLMVSSSVSPGVFTSQQQQQEFGVVDEKPQVQEQQVFSQHQAKHHLFDTIGHNFQAPRLSLLDSGQEVFGRRQQTQLPLFPHHMQQQQQQQSMVMPSTKQQKVSSTGDDASHQLQQAIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGRPFQRAAFYMKEALMSLLHSNAHSFMAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERSDRIHVIDFDIGFGVQWSSFMQEIALRSSGAPSLKVTAIVSPSTCDEVELNFTRENLIQYAKDINVSFEFNVLSIESLNSPSCPLLGKFFDNEAIVVNMPVSSFTNYPSLFPSVLHFVKQLRPKVVVTLDRICDQMDVPLPTNVVHVLQCYSALLESLDAVNVNLDVLQKIERHFIQPAIKKIILGHHHFQEKLPPWRNLFMQSGFSPFTFSNFTEAQAECLVQRAPVRGFHVERKPSSLVLCWQKKELISVSTWRC* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0253 703 MobiDBLite consensus disorder prediction 56 117 - -
Gso3g0253 703 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 7 242 - -
Gso3g0253 703 PANTHER GRAS FAMILY TRANSCRIPTION REGULATOR 320 702 - -
Gso3g0253 703 MobiDBLite consensus disorder prediction 56 114 - -
Gso3g0253 703 ProSiteProfiles GRAS family profile. 336 702 IPR005202 -
Gso3g0253 703 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 320 702 IPR005202 -
Gso3g0253 703 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 242 IPR005202 -
Gso3g0253 703 Pfam GRAS domain family 347 702 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0253 Gso-Chr3 3588777 3591836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0253 344 703 GRAS Transcription Factor Family AT4G00150 53.994 2.00e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso3g0253 GRAS 2.8e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0253 - - gmx:100794596 1270.76