Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0250 ATGATAAGATTTACCGCTATGCTTTCCACAATATTGTTACCACTTGTTCTATGTCTTACTCTCCTTGTGCTTCTCTTGTTCTTCATCCGCAATCTCAGAACCTTCAAGAACCCACCCCTTCCTCCAGGTCCTAAAGGCCTTCCAATAATAGGAAATTTACATCAATTTGATAGTTCCATTCTTTATCTGCAGCTATGGCAACTCTCAAAGAAATATGGCCCTATATTTTCTCTTCAATTAGGGTTAAGGCCAGCCATAGTTGTTTCCTCTCCTAAACTAGCCAAAGAGGTACTGAAAAACCATGACCTAGAGTTTAGTGGACGACCTAAATTACTTGGCCAACAGAAATTGTCCTATAATGGGTCAGAGATTGCATTTTCCCCATACAATGAATATTGGAGACAAATTAGAAAAATTTGTGTTGTCCATATCTTTAGCTCCAAGCGTGTCTCTAGCTTTTCCTCTATAAGAAATTGTGAGGTGAAGCAAATGATAAAAAAAATATCTGGGCATGCCTCTTCTTCGGGTGTTACAAACTTGAATGAGTTACTCATGTCTCTCTCAAGCACTATAATGTGTAGAGTAGCTTTTGGGAGAAGGTATGAGGACGAAGGAAGTGAAAAGAGTAGGTTCCATGTGTTGCTCAATGAGCTTCAGGCCATGATGAGTACTTTCTTTGTTTCAGACTATATTCCATTCACGGGTTGGATTGATAAACTCAAAGGATTGCATGCACGACTTGAACGAAATTTCAAGGAGTTCGATAAGTTCTACCAAGAAGTCATTGATGAGCACATGGATCCCAATAGACAACAAATGGAGGAACATGATATGGTTGATGTCTTGCTTCAATTGAAGAATGATCGTTCTCTTTCAATTGATCTCACTTACGATCACATCAAAGGGGTCCTCATGGACATACTGGTAGCAGGGACAGATACAACTGCAGCTACATCAGTTTGGGCTATGACTGCCCTCATAAAAAACCCTAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGAAATGTGGGAGGCACAAAAGATTTCTTAGATGAAGATGATGTTCAAAAACTTTCCTATTTCAAGGCAATGATAAAGGAGACATTTAGATTGTACCCACCAGCCACACTACTTGTACCAAGAGAATCAAATGAAGAGTGCATTATACATGGCTATCGAATTCCAGCTAAGACAATATTATACGTGAATGCTTGGGTTATTCATAGAGATCCCGAATCTTGGAAAAATCCTCAAGAGTTTATTCCCGAAAGATTCTTGGATAGCGACGTAGATTTTCGTGGACAAGATTTCCAACTAATTCCTTTTGGAACAGGTCGCAGAAGTTGCCCAGGTTTACCTATGGCAGTTGTGATATTAGAACTTGTTCTTGCTAATCTTCTTCATTCCTTTGATTGGGAATTGCCACAAGGGATGATAAAGGAAGACATTGATGTTCAAGTATTGCCAGGACTCACCCAACACAAGAAGAACGATCTTTGTCTTTGTGCCAAGACTAGGAGCCATATATAA 1530 0.3922 MIRFTAMLSTILLPLVLCLTLLVLLLFFIRNLRTFKNPPLPPGPKGLPIIGNLHQFDSSILYLQLWQLSKKYGPIFSLQLGLRPAIVVSSPKLAKEVLKNHDLEFSGRPKLLGQQKLSYNGSEIAFSPYNEYWRQIRKICVVHIFSSKRVSSFSSIRNCEVKQMIKKISGHASSSGVTNLNELLMSLSSTIMCRVAFGRRYEDEGSEKSRFHVLLNELQAMMSTFFVSDYIPFTGWIDKLKGLHARLERNFKEFDKFYQEVIDEHMDPNRQQMEEHDMVDVLLQLKNDRSLSIDLTYDHIKGVLMDILVAGTDTTAATSVWAMTALIKNPRVMKKVQEEIRNVGGTKDFLDEDDVQKLSYFKAMIKETFRLYPPATLLVPRESNEECIIHGYRIPAKTILYVNAWVIHRDPESWKNPQEFIPERFLDSDVDFRGQDFQLIPFGTGRRSCPGLPMAVVILELVLANLLHSFDWELPQGMIKEDIDVQVLPGLTQHKKNDLCLCAKTRSHI* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0250 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Gso3g0250 509 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 Coils Coil 509 509 - -
Gso3g0250 509 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 13 505 - -
Gso3g0250 509 SUPERFAMILY Cytochrome P450 41 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 Gene3D Cytochrome P450 34 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0250 509 PANTHER CYTOCHROME P450 71B11-RELATED 13 505 - -
Gso3g0250 509 Pfam Cytochrome P450 41 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0250 Gso-Chr3 3512212 3517044 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0250 15 502 Cytochrome P450 AT4G31500 48.065 2.00e-172 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0250 - - gmx:100787727 974.156