Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0247 ATGGTCACAATGCTTTTACCACTTGTTCTATGTCTTACTCTCCCTGTGTTTTTCTTGTTCTTCATCCAACACCTTAGAGCCTTCAAGAAACCCCCCCTACCTCCAGGTCCTAAAGGCCTTCCAATAATTGGAAATTTACATAAATTAGATAACTCCATTCTTTGCATGCAGCTATGGCACCTCTCAAAGAAATATGGCCCTATATTTTCCCTTCAATTAGGTTTAAGGAAAACTATTGTTATTTCCTCACCTAAATTGGCCAAAGAGGTACTGAAAAACCATGACCTAGAGTTTAGTGGACGACCTAAACTACTTCCCCAACAGAAATTGTCCTATAATGGGTCAGAGATTGTGTTTTCCCCGTACAACGAATATTGGAGAGAAATGAGAAAAATTTGTGTTGCCCATATCTTTAGTTCCAAGCGTGTCTCTAGCTTTTCATCTATAAGAAAGTTTGAGGTGAAGCAAATGATCAAAACAATATCTGGGCATGCCTCGTCTTCGGGTGTTACAAACTTGAGTGAGTTACTCATATCTCTCTCAAGCACTATAATATGTAGAGTTGCTTTTGGGAGAAGGTATGAAGATGAAGGAAGTGAAAGGAGTAGGTTCCATGGGTTGCTCAATGAGCTTCAGGTATTGATGGGTACCTTCTTTATTTCGGATTTTATTCCATTCACGGGTTGGATTGATAAACTCAAAGGATTGCATGCACGACTTGAAAGAAATTTCAAGGAGCTAGATAAGTTCTACCAAGAGGTAATTGATGAACACATGGATCCAAATAGACAACATGCAGAGGAACAAGATATGGTTGATGTCTTGCTTCAACTGAAGAATGATCGTTCGCTTTCAATTGATCTAACTTATGATCACATCAAAGGGGTCCTCATGAGCGATTTTTCGCACAAGAGCTTTACATTGGTGTACACTAACTATAGCAGATTTGATAAGAACATACTTGCAGCAGGTACAGATACCACTGCAGCCACATCAGTTTGGGCTATGACAGCCCTAGTAAAAAACCCTAGAGTAATGAAGAAAGTTCAAGAAGAAGTTAGAAATGTGGGGGGAACAAAAGATTTCTTAGATGAAGATGATATTCAAAAACTTCCCTATTTCAAGGCAATGATAAAAGAGACGTTGAGATTGCACCTACCAGGTCCACTACTTGTACCAAGAGAATCAACTGAAGAGTGCATTGTAGATGGCTACCGAATTCCAGCCAAGACAATTGTGTATGTGAATGCTTGGGTTATTCAAAGAGACCCTGAAGTTTGGAAAAATCCCGAAGAATTTTGTCCTGAAAGATTCTTAGATAGTGCTATAGATTATCGTGGACAAGATTTCGAATTAATTCCTTTTGGTGCAGGTCGTAGAATTTGCCCAGGTATACTTATGGCGGCTGTGACATTAGAACTTGTCCTTGCTAATCTTCTGCATTCCTTTGATTGGGAATTGCCGCAAGGGATAGTAAAGGAAGACATTGATTTTGAAGTATTGCCAGGAATTACCCAACACAAGAAGAATCATCTTTGTCTTTGTGCCAAGACCAGGAGCCATATATAA 1569 0.3932 MVTMLLPLVLCLTLPVFFLFFIQHLRAFKKPPLPPGPKGLPIIGNLHKLDNSILCMQLWHLSKKYGPIFSLQLGLRKTIVISSPKLAKEVLKNHDLEFSGRPKLLPQQKLSYNGSEIVFSPYNEYWREMRKICVAHIFSSKRVSSFSSIRKFEVKQMIKTISGHASSSGVTNLSELLISLSSTIICRVAFGRRYEDEGSERSRFHGLLNELQVLMGTFFISDFIPFTGWIDKLKGLHARLERNFKELDKFYQEVIDEHMDPNRQHAEEQDMVDVLLQLKNDRSLSIDLTYDHIKGVLMSDFSHKSFTLVYTNYSRFDKNILAAGTDTTAATSVWAMTALVKNPRVMKKVQEEVRNVGGTKDFLDEDDIQKLPYFKAMIKETLRLHLPGPLLVPRESTEECIVDGYRIPAKTIVYVNAWVIQRDPEVWKNPEEFCPERFLDSAIDYRGQDFELIPFGAGRRICPGILMAAVTLELVLANLLHSFDWELPQGIVKEDIDFEVLPGITQHKKNHLCLCAKTRSHI* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0247 522 Gene3D Cytochrome P450 27 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Gso3g0247 522 SUPERFAMILY Cytochrome P450 34 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PANTHER CYTOCHROME P450 71B11-RELATED 6 518 - -
Gso3g0247 522 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 518 - -
Gso3g0247 522 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0247 522 Pfam Cytochrome P450 34 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0247 Gso-Chr3 3471353 3474128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0247 20 515 Cytochrome P450 AT4G31500 46.894 6.25e-168 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0247 - - gsj:114405918 1012.29